RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 CLRN1P58418 232 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 ATP13A4Q4VNC1 1196 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 BROXQ5VW32 411 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 IFT22Q9H7X7 185 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 SPC25Q9HBM1 224 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 TMEM74BQ9NUR3 256 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 PRKAB1Q9Y478 270 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 PPP2R3BQ9Y5P8 575 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 A0A1B0GTW7 788 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 WDR91A4D1P6 747 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 EYA4O95677 639 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 CXADRP78310 365 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 TERF2Q15554 542 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 GPR158Q5T848 1215 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 ZNF425Q6IV72 752 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 SLC41A1Q8IVJ1 513 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 FAM177A1Q8N128 213 aaPredicted RBP6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 RSAD2Q8WXG1 361 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 TTC1Q99614 292 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 GALNT9Q9HCQ5 603 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 IL17RBQ9NRM6 502 aa6.15□□□□□ -1.42
SMCHD1-207ENST00000581711 WIPF3A6NGB9 483 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 CTSSP25774 331 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 CRHR1P34998 444 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 TMPRSS15P98073 1019 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 KRTAP5-11Q6L8G4 156 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 MED25Q71SY5 747 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 C11orf74Q86VG3 221 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 OR14C36Q8NHC7 312 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 ZNF480Q8WV37 535 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 SLC5A5Q92911 643 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 FUBP3Q96I24 572 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 BOD1Q96IK1 185 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 HEPHQ9BQS7 1158 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 VTA1Q9NP79 307 aa6.14□□□□□ -1.43
SMCHD1-207ENST00000581711 CXorf49A8MYA2 514 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 ADCY6O43306 1168 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 CANXP27824 592 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 MANFP55145 182 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 OCRLQ01968 901 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 TRIM25Q14258 630 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 STAT4Q14765 748 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 FAM47AQ5JRC9 791 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 AKNAD1Q5T1N1 836 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 RNF187Q5TA31 235 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 CMIPQ8IY22 773 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 FAM43AQ8N2R8 423 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 CLRN3Q8NCR9 226 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 UROC1Q96N76 676 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 REXO4Q9GZR2 422 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 WNT8AQ9H1J5 351 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 RNPEPQ9H4A4 650 aa6.13□□□□□ -1.43
SMCHD1-207ENST00000581711 SNRPA1P09661 255 aaKnown RBP6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 LSP1P33241 339 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 PHC1P78364 1004 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 PNPLA7Q6ZV29 1317 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 ZNF610Q8N9Z0 462 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 COG1Q8WTW3 980 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 NACC2Q96BF6 587 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 BRIP1Q9BX63 1249 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 ANO3Q9BYT9 981 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 PRDM12Q9H4Q4 367 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 KCTD5Q9NXV2 234 aa6.12□□□□□ -1.43
SMCHD1-207ENST00000581711 ZEB2O60315 1214 aa6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 FGFR4P22455 802 aa6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 PTF1AQ7RTS3 328 aa6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 DDX42Q86XP3 938 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 ATL2Q8NHH9 583 aa6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 DDB2Q92466 427 aa6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 PTCD3Q96EY7 689 aaKnown RBP6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 TOPORSQ9NS56 1045 aaPredicted RBP6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 KCNE5Q9UJ90 142 aa6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 DMTF1Q9Y222 760 aa6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 APOBEC2Q9Y235 224 aaKnown RBP6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 CDY2AQ9Y6F7 541 aa6.11□□□□□ -1.43
SMCHD1-207ENST00000581711 KAT6AQ92794 2004 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 CCDC78A2IDD5 438 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 KDM1AO60341 852 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 RAB11FIP3O75154 756 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 EVA1CP58658 441 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 KRTAP10-6P60371 365 aaPredicted RBP6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 RAP2BP61225 183 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 AMPD3Q01432 767 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 PDCD1Q15116 288 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 REPS2Q8NFH8 660 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 WDR66Q8TBY9 1149 aa6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 NOC2LQ9Y3T9 749 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-207ENST00000581711 AATKQ6ZMQ8 1374 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 GPR39O43194 453 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 BRINP1O60477 761 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 CELA2AP08217 269 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 HOXB6P17509 224 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 PTPN7P35236 360 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 CDKN1CP49918 316 aaPredicted RBP6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 HSD11B2P80365 405 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 CYP2A13Q16696 494 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 ZNF572Q7Z3I7 529 aaPredicted RBP6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 LNX2Q8N448 690 aa6.09□□□□□ -1.43
SMCHD1-207ENST00000581711 DPF1Q92782 380 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms