RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RIN2Q8WYP3 895 aaPredicted RBP5□□□□□ -1.61
SMCHD1-206ENST00000581631 EAF2Q96CJ1 260 aaPredicted RBP5□□□□□ -1.61
SMCHD1-206ENST00000581631 RNPC3Q96LT9 517 aaKnown RBP5□□□□□ -1.61
SMCHD1-206ENST00000581631 MRI1Q9BV20 369 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5□□□□□ -1.61
SMCHD1-206ENST00000581631 CASS4Q9NQ75 786 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 LRIT1Q9P2V4 623 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 AATKQ6ZMQ8 1374 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 SLC6A2P23975 617 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 IL2P60568 153 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 HSD11B2P80365 405 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 OTUD7BQ6GQQ9 843 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 NIM1KQ8IY84 436 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 Q8NA96 180 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 GPR156Q8NFN8 814 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 FBXO18Q8NFZ0 1043 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 OR2W6PQ8NHA6 318 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 TSPEARQ8WU66 669 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 UROC1Q96N76 676 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 TIMP4Q99727 224 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 KRTAP1-5Q9BYS1 174 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 USP25Q9UHP3 1055 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 KCNG1Q9UIX4 513 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 EDARQ9UNE0 448 aa4.99□□□□□ -1.61
SMCHD1-206ENST00000581631 GPANK1O95872 356 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 ADSLP30566 484 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 ZNF81P51508 661 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 MAPK7Q13164 816 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 UBXN2BQ14CS0 331 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 AHI1Q8N157 1196 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 REXO4Q9GZR2 422 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 TOPORSQ9NS56 1045 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 FBXO34Q9NWN3 711 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 ASB6Q9NWX5 421 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 ZNF70Q9UC06 446 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 SLC23A1Q9UHI7 598 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 DPP7Q9UHL4 492 aa4.98□□□□□ -1.61
SMCHD1-206ENST00000581631 AKR1B10O60218 316 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 ERN1O75460 977 aaKnown RBP4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 BPIP17213 487 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 WT1P19544 449 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 ENPP1P22413 925 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 ALDH1A3P47895 512 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 PPP3CAQ08209 521 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 SART3Q15020 963 aaKnown RBP4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 UGT8Q16880 541 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 SEM1Q6ZVN7 128 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 C16orf86Q6ZW13 317 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 C11orf74Q86VG3 221 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 THNSL2Q86YJ6 484 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 SSH3Q8TE77 659 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 DPF1Q92782 380 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 IL17RBQ9NRM6 502 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 HSFX1Q9UBD0 423 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 NOC2LQ9Y3T9 749 aaKnown RBP4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 ENTPD2Q9Y5L3 495 aa4.97□□□□□ -1.61
SMCHD1-206ENST00000581631 GSG1L2A8MUP6 293 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 RAB11FIP3O75154 756 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 POMCP01189 267 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 SRSF4Q08170 494 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 ADRM1Q16186 407 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 GEN1Q17RS7 908 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 ZNF425Q6IV72 752 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 HOMER1Q86YM7 354 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 DHX37Q8IY37 1157 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 SARAFQ96BY9 339 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 PTCD3Q96EY7 689 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 DRC1Q96MC2 740 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 SLC29A3Q9BZD2 475 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 PIF1Q9H611 641 aa4.96□□□□□ -1.62
SMCHD1-206ENST00000581631 CELA2AP08217 269 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 IL2RBP14784 551 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 ATP5JP18859 108 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 FPR1P21462 350 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 ECHS1P30084 290 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 FOLR3P41439 243 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 DALRD3Q5D0E6 543 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 CLRN3Q8NCR9 226 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 CASKIN2Q8WXE0 1202 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 RAX2Q96IS3 184 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 ACAP3Q96P50 834 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 ZSWIM4Q9H7M6 989 aa4.95□□□□□ -1.62
SMCHD1-206ENST00000581631 ELFN1P0C7U0 828 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 RAP2AP10114 183 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 CKBP12277 381 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 CTGFP29279 349 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 MRPS9P82933 396 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 CDK17Q00537 523 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 SLFN5Q08AF3 891 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 ATP13A4Q4VNC1 1196 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 GJC2Q5T442 439 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 PTF1AQ7RTS3 328 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 KCNK18Q7Z418 384 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 PQLC1Q8N2U9 271 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 ZNF366Q8N895 744 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 UBXN4Q92575 508 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 ORAI2Q96SN7 254 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 MYOCQ99972 504 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 MOCS1Q9NZB8 636 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms