RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 SEZ6Q53EL9 994 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-211ENST00000581536 SMRP1Q8NCR6 262 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 TMEM161BQ8NDZ6 487 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 CALML4Q96GE6 196 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 DRC1Q96MC2 740 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 KLHL5Q96PQ7 755 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 CDCA3Q99618 268 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-211ENST00000581536 CCSER1Q9C0I3 900 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 HAPLN2Q9GZV7 340 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 ARHGAP28Q9P2N2 729 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 USP15Q9Y4E8 981 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-211ENST00000581536 SRPRBQ9Y5M8 271 aaKnown RBP10.66□□□□□ -0.7
TOP3A-211ENST00000581536 HCFC2Q9Y5Z7 792 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 A0A087X0B3 334 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 CASTOR2A6NHX0 329 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 ABLIM1O14639 778 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 MEFVO15553 781 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-211ENST00000581536 CNPP09543 421 aaKnown RBP10.65□□□□□ -0.7
TOP3A-211ENST00000581536 PLS3P13797 630 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 DMP1Q13316 513 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-211ENST00000581536 PKP1Q13835 747 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 PTPN14Q15678 1187 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 GLRA4Q5JXX5 417 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 KIAA0319Q5VV43 1072 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 GPBP1Q86WP2 473 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 ADHFE1Q8IWW8 467 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 HACE1Q8IYU2 909 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-211ENST00000581536 HASPINQ8TF76 798 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 RSPH1Q8WYR4 309 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 RAD54LQ92698 747 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 REEP2Q9BRK0 252 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 ADPGKQ9BRR6 497 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 COLEC11Q9BWP8 271 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 CDT1Q9H211 546 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 RAPGEFL1Q9UHV5 662 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 TNFSF13BQ9Y275 285 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 RBM19Q9Y4C8 960 aaKnown RBP10.65□□□□□ -0.7
TOP3A-211ENST00000581536 IRAK3Q9Y616 596 aa10.65□□□□□ -0.7
TOP3A-211ENST00000581536 TADA2AO75478 443 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 BMP15O95972 392 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 SOD2P04179 222 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 THP07101 528 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 SPATA31D3P0C874 917 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 MAPTP10636 758 aaKnown RBP10.64□□□□□ -0.71
TOP3A-211ENST00000581536 HARSP12081 509 aaKnown RBP10.64□□□□□ -0.71
TOP3A-211ENST00000581536 PROZP22891 400 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 KLRC2P26717 231 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 NMT1P30419 496 aaKnown RBP10.64□□□□□ -0.71
TOP3A-211ENST00000581536 GRIK3Q13003 919 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 SLC39A14Q15043 492 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 CD300LGQ6UXG3 332 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 ALKAL1Q6UXT8 129 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 SPATA31D4Q6ZUB0 917 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 DYMQ7RTS9 669 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 RETREG3Q86VR2 466 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 GLYCTKQ8IVS8 523 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 RNF168Q8IYW5 571 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-211ENST00000581536 KCTD17Q8N5Z5 321 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 MYCT1Q8N699 235 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 SUSD6Q92537 303 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 RPGRIP1Q96KN7 1286 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 ZMAT2Q96NC0 199 aaKnown RBP10.64□□□□□ -0.71
TOP3A-211ENST00000581536 RPS6KC1Q96S38 1066 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 TCHPQ9BT92 498 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 TIPINQ9BVW5 301 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 MRPL4Q9BYD3 311 aaKnown RBP10.64□□□□□ -0.71
TOP3A-211ENST00000581536 IKZF4Q9H2S9 585 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 ZHX3Q9H4I2 956 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 ZSCAN16Q9H4T2 348 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-211ENST00000581536 C17orf75Q9HAS0 396 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 GOLGA2P5Q9HBQ8 144 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 MRPL17Q9NRX2 175 aaKnown RBP10.64□□□□□ -0.71
TOP3A-211ENST00000581536 CHST7Q9NS84 486 aa10.64□□□□□ -0.71
TOP3A-211ENST00000581536 PHLPP2Q6ZVD8 1323 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 SMIM28A0A1B0GU29 152 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 FAM86C2PA6NEL3 165 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 MYMKA6NI61 221 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 PI4K2BG5E9Z4 385 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 TEX28O15482 410 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 SLC26A4O43511 780 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 S1PR4O95977 384 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 RPL17P18621 184 aaKnown RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 SP100P23497 879 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 GRM5P41594 1212 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 CLCNKBP51801 687 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 SMTNP53814 917 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 NCKAP1LP55160 1127 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 SOX4Q06945 474 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 SPAG1Q07617 926 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 TUSC3Q13454 348 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 HSP90AA2PQ14568 343 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 BMS1Q14692 1282 aaKnown RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 DCAF4L1Q3SXM0 396 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 ZC2HC1CQ53FD0 456 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 RARS2Q5T160 578 aaKnown RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 FUT10Q6P4F1 479 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 PRSS55Q6UWB4 352 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 HAUS6Q7Z4H7 955 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms