RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ERVK-21P61565 698 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 RNASELQ05823 741 aaKnown RBP16.39■□□□□ 0.21
MKS1-210ENST00000581180 SOX4Q06945 474 aaPredicted RBP16.39■□□□□ 0.21
MKS1-210ENST00000581180 SPAG1Q07617 926 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 TUSC3Q13454 348 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 PSMD6Q15008 389 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 CEP135Q66GS9 1140 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 JADE1Q6IE81 842 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 C11orf57Q6ZUT1 292 aaPredicted RBP16.39■□□□□ 0.21
MKS1-210ENST00000581180 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 KIF12Q96FN5 646 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 CEP63Q96MT8 703 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 TMEM175Q9BSA9 504 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 MKNK1Q9BUB5 465 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 DNAJB4Q9UDY4 337 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 FRMD4BQ9Y2L6 1034 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 C2CD2Q9Y426 696 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 CHD9Q3L8U1 2897 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 CHD7Q9P2D1 2997 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 GALTP07902 379 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 LAG3P18627 525 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 PSMC2P35998 433 aaKnown RBP16.38■□□□□ 0.21
MKS1-210ENST00000581180 SURF1Q15526 300 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 ZSCAN23Q3MJ62 389 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 PPP2R2DQ66LE6 453 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 NT5DC4Q86YG4 428 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 COLGALT1Q8NBJ5 622 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 C18orf25Q96B23 403 aaPredicted RBP16.38■□□□□ 0.21
MKS1-210ENST00000581180 EEF2KMTQ96G04 330 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 LRCH3Q96II8 777 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 FAM193BQ96PV7 902 aaPredicted RBP16.38■□□□□ 0.21
MKS1-210ENST00000581180 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
MKS1-210ENST00000581180 C17orf80Q9BSJ5 609 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 SLC28A3Q9HAS3 691 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 SLC38A7Q9NVC3 462 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 VWA8A3KMH1 1905 aa16.38■□□□□ 0.21
MKS1-210ENST00000581180 TMEM265A0A087WTH1 108 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 C5orf67F2Z3F1 127 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 SLC16A3O15427 465 aaKnown RBP16.37■□□□□ 0.21
MKS1-210ENST00000581180 ZC3H11AO75152 810 aaKnown RBP eCLIP16.37■□□□□ 0.21
MKS1-210ENST00000581180 CYP3A5P20815 502 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 BMPR1AP36894 532 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 SLC11A1P49279 550 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 BCAR1P56945 870 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 ENPEPQ07075 957 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 TMEM132DQ14C87 1099 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 SPATA1Q5VX52 437 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 KCNT2Q6UVM3 1135 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 FILIP1Q7Z7B0 1213 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 FAM186BQ8IYM0 893 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 TMEM130Q8N3G9 435 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 CSGALNACT2Q8N6G5 542 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 PARD3BQ8TEW8 1205 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 SAMD11Q96NU1 681 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 PAAF1Q9BRP4 392 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 GOLGA2P5Q9HBQ8 144 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 CACNG4Q9UBN1 327 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 TUBGCP4Q9UGJ1 667 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 UBQLN1Q9UMX0 589 aaKnown RBP16.37■□□□□ 0.21
MKS1-210ENST00000581180 RWDD3Q9Y3V2 267 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 PTPRJQ12913 1337 aa16.37■□□□□ 0.21
MKS1-210ENST00000581180 COL4A4P53420 1690 aaPredicted RBP16.37■□□□□ 0.21
MKS1-210ENST00000581180 CASTOR2A6NHX0 329 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 NRP1O14786 923 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 LRPAP1P30533 357 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 PBX3P40426 434 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 CLDN10P78369 228 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 C1orf220Q5T0J3 134 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 SPOUT1Q5T280 376 aaKnown RBP16.36■□□□□ 0.21
MKS1-210ENST00000581180 SLC39A11Q8N1S5 342 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 TMC2Q8TDI7 906 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 ZNF558Q96NG5 402 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 CGRRF1Q99675 332 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 PLVAPQ9BX97 442 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 SRRTQ9BXP5 876 aaKnown RBP16.36■□□□□ 0.21
MKS1-210ENST00000581180 DNAJC25Q9H1X3 360 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 AAASQ9NRG9 546 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 INTS13Q9NVM9 706 aa16.36■□□□□ 0.21
MKS1-210ENST00000581180 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.36■□□□□ 0.21
MKS1-210ENST00000581180 CARNS1A5YM72 827 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 LRRIQ3A6PVS8 624 aaPredicted RBP16.35■□□□□ 0.21
MKS1-210ENST00000581180 NT5C1B-RDH14C9J2C7 533 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 XPOTO43592 962 aaKnown RBP16.35■□□□□ 0.21
MKS1-210ENST00000581180 ALDH2P05091 517 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 RB1P06400 928 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
MKS1-210ENST00000581180 CTNNB1P35222 781 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 OR1G1P47890 313 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 GUCY2FP51841 1108 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 UPP1Q16831 310 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
MKS1-210ENST00000581180 CD300LGQ6UXG3 332 aa16.35■□□□□ 0.21
MKS1-210ENST00000581180 INTS8Q75QN2 995 aaKnown RBP16.35■□□□□ 0.21
MKS1-210ENST00000581180 TMEM173Q86WV6 379 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms