RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 RALYLQ86SE5 291 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 MFSD6LQ8IWD5 586 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 YAF2Q8IY57 180 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 PNPLA1Q8N8W4 532 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 DEPDC1BQ8WUY9 529 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 TMEM143Q96AN5 459 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 LZTS2Q9BRK4 669 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 SLITRK6Q9H5Y7 841 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 UBN1Q9NPG3 1134 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 COL4A3BPQ9Y5P4 624 aa15.71■□□□□ 0.11
CSNK1D-213ENST00000580446 I3L4J1 428 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 AKAP3O75969 853 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 DDAH1O94760 285 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 RHOBTB1O94844 696 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 CYP21A2P08686 494 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 BCKDHBP21953 392 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 ARPP19P56211 112 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 NFXL1Q6ZNB6 911 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 PDZD4Q76G19 769 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 CYP2U1Q7Z449 544 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 RAB44Q7Z6P3 723 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 ZNF605Q86T29 641 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 ZNF579Q8NAF0 562 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 PIGKQ92643 395 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 LRRC3BQ96PB8 259 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 UNC45AQ9H3U1 944 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 C8orf33Q9H7E9 229 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 PARP2Q9UGN5 583 aa15.7■□□□□ 0.1
CSNK1D-213ENST00000580446 FAM221BA6H8Z2 402 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 SMCO2A6NFE2 343 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 DDX11L8A8MPP1 907 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 PRRG1O14668 218 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 TSPAN1O60635 241 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 MAFO75444 373 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 FOSP01100 380 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 SMARCA1P28370 1054 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 CDC42EP1Q00587 391 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 STXBP5Q5T5C0 1151 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 ARMCX6Q7L4S7 300 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 MARCH9Q86YJ5 346 aa15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 PRPF31Q8WWY3 499 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 ZBTB47Q9UFB7 747 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-213ENST00000580446 E7EWF7 191 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 SEC24AO95486 1093 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 PRKCBP05771 671 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 DHPSP49366 369 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 GRIK3Q13003 919 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 TMTC3Q6ZXV5 915 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 PIP4P1Q86T03 277 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 RALGPS2Q86X27 583 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 OR2I1PQ8NGU4 316 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 CAMK1GQ96NX5 476 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 NIFKQ9BYG3 293 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 TPSD1Q9BZJ3 242 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 AVENQ9NQS1 362 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 MTRRQ9UBK8 725 aa15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 MBD1Q9UIS9 605 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 ATXN2Q99700 1313 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-213ENST00000580446 ACACAQ13085 2346 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 ASCC3Q8N3C0 2202 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 CCDC163A0A0D9SF12 145 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 CCDC194A0A1B0GVG4 234 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 ERLIN2O94905 339 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 NPTXRO95502 500 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 U2AF2P26368 475 aaKnown RBP eCLIP15.67■□□□□ 0.19e-9■■■□□ 18.4
CSNK1D-213ENST00000580446 TKTP29401 623 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 CLK2P49760 499 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 GNAQP50148 359 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 NPEPPSP55786 919 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 LAMTOR4Q0VGL1 99 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 TRIM61Q5EBN2 209 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 NAIF1Q69YI7 327 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 FSTL4Q6MZW2 842 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 ZNF843Q8N446 348 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 CNNM3Q8NE01 707 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 CRYGNQ8WXF5 182 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 CYP4F11Q9HBI6 524 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 GIT1Q9Y2X7 761 aa15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 MYH9P35579 1960 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-213ENST00000580446 CHADO15335 359 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 ARHGAP6O43182 974 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 B4GALT5O43286 388 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 RNF40O75150 1001 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 EGFP01133 1207 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 ROR1Q01973 937 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 XKR3Q5GH77 459 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 PMS2CLQ68D20 193 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 SRGAP1Q7Z6B7 1085 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 MB21D2Q8IYB1 491 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 RNF149Q8NC42 400 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 NCOA7Q8NI08 942 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 SHKBP1Q8TBC3 707 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 LENG9Q96B70 501 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 MSANTD3Q96H12 275 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 UBL7Q96S82 380 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 MAP3K14Q99558 947 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 TRIM6Q9C030 488 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 CSRNP2Q9H175 543 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 CEP72Q9P209 647 aa15.66■□□□□ 0.1
CSNK1D-213ENST00000580446 USP9XQ93008 2570 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms