RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 LONRF1Q17RB8 773 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 SGO2Q562F6 1265 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 EEPD1Q7L9B9 569 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 CCDC50Q8IVM0 306 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 ARFGAP2Q8N6H7 521 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 HAPLN2Q9GZV7 340 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 JPH1Q9HDC5 661 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-209ENST00000580095 ANKEF1Q9NU02 776 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 ASIC3Q9UHC3 531 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 GTF3C4Q9UKN8 822 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 DIS3Q9Y2L1 958 aaKnown RBP11.21□□□□□ -0.61
TOP3A-209ENST00000580095 ATP8B3O60423 1300 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 FAM187AA6NFU0 413 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 CHN1P15882 459 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 SFNP31947 248 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 BACE1P56817 501 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 KRT17Q04695 432 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 LRRC14Q15048 493 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 CLEC16AQ2KHT3 1053 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 FAM182AQ5T1J6 154 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 EMC10Q5UCC4 262 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 ACAD10Q6JQN1 1059 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 SEPT14Q6ZU15 432 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 CPLX4Q7Z7G2 160 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 FMNL3Q8IVF7 1028 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 GPD1LQ8N335 351 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 TMEM130Q8N3G9 435 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 MTMR14Q8NCE2 650 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 ACSF2Q96CM8 615 aaPredicted RBP11.21□□□□□ -0.62
TOP3A-209ENST00000580095 MFSD14AQ96MC6 490 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 RPS6KC1Q96S38 1066 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 IWS1Q96ST2 819 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.62
TOP3A-209ENST00000580095 WNT8AQ9H1J5 351 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 ST6GALNAC4Q9H4F1 302 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 CYP26B1Q9NR63 512 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 C1orf112Q9NSG2 853 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 CTNNAL1Q9UBT7 734 aa11.21□□□□□ -0.62
TOP3A-209ENST00000580095 ZNF541Q9H0D2 1346 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 RGS16O15492 202 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 EDN1P05305 212 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 ATP13A4Q4VNC1 1196 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 ZNF394Q53GI3 561 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 TDRD10Q5VZ19 366 aaKnown RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 TMEM270Q6UE05 265 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 ANKS1BQ7Z6G8 1248 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 PSPC1Q8WXF1 523 aaKnown RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 CCDC114Q96M63 670 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 FNBP1Q96RU3 617 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 A1CFQ9NQ94 594 aaKnown RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 MTUS1Q9ULD2 1270 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 KIF13BQ9NQT8 1826 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 MROH7Q68CQ1 1323 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 TTC36A6NLP5 189 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 PI4K2BG5E9Z4 385 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 TCF4P15884 667 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 CD58P19256 250 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 PIK3CAP42336 1068 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 BAG6P46379 1132 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 POLGP54098 1239 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 HADHBP55084 474 aaKnown RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 SF3B2Q13435 895 aaKnown RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 DRP2Q13474 957 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 HP1BP3Q5SSJ5 553 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 ZFYVE27Q5T4F4 411 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 CCDC91Q7Z6B0 441 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 ASAP3Q8TDY4 903 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 KIFAP3Q92845 792 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 TAOK3Q9H2K8 898 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 APOBEC3GQ9HC16 384 aaKnown RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 SLC9A2Q9UBY0 812 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 PCYOX1Q9UHG3 505 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 CNOT7Q9UIV1 285 aaKnown RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 ZNF214Q9UL59 606 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-209ENST00000580095 COQ4Q9Y3A0 265 aa11.2□□□□□ -0.62
TOP3A-209ENST00000580095 TP73O15350 636 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ECEL1O95672 775 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ATP4AP20648 1035 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 DSG3P32926 999 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 BIRC2Q13490 618 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 AGBL2Q5U5Z8 902 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 MCOLN2Q8IZK6 566 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 OR5B17Q8NGF7 314 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 NSUN6Q8TEA1 469 aaKnown RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ATP6V0A1Q93050 837 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ADAM7Q9H2U9 754 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 GGT7Q9UJ14 662 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 NFKBIEO00221 500 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 VNN1O95497 513 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 RALAP11233 206 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 PTPRAP18433 802 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 IBSPP21815 317 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 PSMC4P43686 418 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 KAZNQ674X7 775 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 MMS22LQ6ZRQ5 1243 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ZBTB33Q86T24 672 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ZNF280CQ8ND82 737 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 C1orf131Q8NDD1 294 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms