RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 FHOD1Q9Y613 1164 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 CFAP69A5D8W1 941 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 MSH4O15457 936 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 IL1RL1Q01638 556 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 NSUN2Q08J23 767 aaKnown RBP eCLIP16.05■□□□□ 0.16
ITGB4-206ENST00000579662 HIF1AQ16665 826 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 NOP9Q86U38 636 aaKnown RBP16.05■□□□□ 0.16
ITGB4-206ENST00000579662 ASAP3Q8TDY4 903 aa16.05■□□□□ 0.16
ITGB4-206ENST00000579662 PDCD6IPQ8WUM4 868 aaKnown RBP16.05■□□□□ 0.16
ITGB4-206ENST00000579662 ESYT3A0FGR9 886 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 MGEA5O60502 916 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 BRAFP15056 766 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 PRAMEP78395 509 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 GSPT2Q8IYD1 628 aaKnown RBP16.04■□□□□ 0.16
ITGB4-206ENST00000579662 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
ITGB4-206ENST00000579662 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
ITGB4-206ENST00000579662 CYP11B2P19099 503 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 ERGIC2Q96RQ1 377 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 CHP1Q99653 195 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 RTFDC1Q9BY42 306 aaPredicted RBP16.04■□□□□ 0.16
ITGB4-206ENST00000579662 C6orf222P0C671 652 aaPredicted RBP16.04■□□□□ 0.16
ITGB4-206ENST00000579662 RPS6P62753 249 aaKnown RBP16.04■□□□□ 0.16
ITGB4-206ENST00000579662 DCAF4L1Q3SXM0 396 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 ZC2HC1CQ53FD0 456 aaPredicted RBP16.04■□□□□ 0.16
ITGB4-206ENST00000579662 USP49Q70CQ1 688 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 TAAR1Q96RJ0 339 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 WDR24Q96S15 920 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 NIF3L1Q9GZT8 377 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 UNC45AQ9H3U1 944 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 PPCSQ9HAB8 311 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 INTUQ9ULD6 942 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 G3BP2Q9UN86 482 aaKnown RBP16.04■□□□□ 0.16
ITGB4-206ENST00000579662 PPP2R3BQ9Y5P8 575 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 VWDEQ8N2E2 1590 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 MROH2AA6NES4 1674 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 PPP1R3GB7ZBB8 358 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 CFLARO15519 480 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 SKIP12755 728 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 ITGA4P13612 1032 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 SREBF2Q12772 1141 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 EFCAB12Q6NXP0 572 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 COG1Q8WTW3 980 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 NT5C1AQ9BXI3 368 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 FBXL5Q9UKA1 691 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 ADAM21Q9UKJ8 722 aa16.04■□□□□ 0.16
ITGB4-206ENST00000579662 GMNCA6NCL1 334 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 E5RI56 91 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 IL1R1P14778 569 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 PDGFRAP16234 1089 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 FOXP3Q9BZS1 431 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 SIK2Q9H0K1 926 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 SMAPO00193 183 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 RPS6KA5O75582 802 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 FXR1P51114 621 aaKnown RBP eCLIP16.03■□□□□ 0.16
ITGB4-206ENST00000579662 PID1Q7Z2X4 250 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 ENGASEQ8NFI3 743 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 GRAMD1AQ96CP6 724 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 MMTAG2Q9BU76 263 aaKnown RBP16.03■□□□□ 0.16
ITGB4-206ENST00000579662 GTSE1Q9NYZ3 720 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 ZFP69BQ9UJL9 534 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 ITIH2P19823 946 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 PNPLA4P41247 253 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 GTF2A2P52657 109 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 TGFB2P61812 414 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 NCAPHQ15003 741 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 MMS22LQ6ZRQ5 1243 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 CPA5Q8WXQ8 436 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 RAPGEF5Q92565 580 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 AGPAT5Q9NUQ2 364 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 DFFAO00273 331 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
ITGB4-206ENST00000579662 KLHDC7AQ5VTJ3 777 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 HIBCHQ6NVY1 386 aaPredicted RBP16.03■□□□□ 0.16
ITGB4-206ENST00000579662 TC2NQ8N9U0 490 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 PPHLN1Q8NEY8 458 aaKnown RBP16.03■□□□□ 0.16
ITGB4-206ENST00000579662 AMACRQ9UHK6 382 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 TMEM247A6NEH6 219 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 CYP2C9P11712 490 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 SREBF1P36956 1147 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 E4F1Q66K89 784 aaPredicted RBP16.03■□□□□ 0.16
ITGB4-206ENST00000579662 TRMT10CQ7L0Y3 403 aaKnown RBP16.03■□□□□ 0.16
ITGB4-206ENST00000579662 KRT35Q92764 455 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 PIDD1Q9HB75 910 aa16.03■□□□□ 0.16
ITGB4-206ENST00000579662 TNS2Q63HR2 1409 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 TMCC1O94876 653 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 PYGBP11216 843 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 LAMB3Q13751 1172 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 P3H1Q32P28 736 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 NOTUMQ6P988 496 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 MTHFD1LQ6UB35 978 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 LRIG3Q6UXM1 1119 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 SAMD7Q7Z3H4 446 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 DCP1BQ8IZD4 617 aaKnown RBP16.02■□□□□ 0.16
ITGB4-206ENST00000579662 ASIC4Q96FT7 647 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 NUDT12Q9BQG2 462 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 TBX20Q9UMR3 447 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 TADA3O75528 432 aa16.02■□□□□ 0.16
ITGB4-206ENST00000579662 PCSK1P29120 753 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms