RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 LIN9Q5TKA1 542 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 NOTUMQ6P988 496 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 TXNDC11Q6PKC3 985 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 LRRC3BQ96PB8 259 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 JPH2Q9BR39 696 aaPredicted RBP12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 NFKBIZQ9BYH8 718 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 ARRDC1-AS1Q9H2J1 176 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 TRPV4Q9HBA0 871 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 KCNMB3Q9NPA1 279 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 TCEAL9Q9UHQ7 104 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 RAB23Q9ULC3 237 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 POLIQ9UNA4 740 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 MRPS23Q9Y3D9 190 aaKnown RBP12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 PPME1Q9Y570 386 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 KLF18A0A0U1RQI7 1052 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 WDR27A2RRH5 827 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 SRRM3A6NNA2 597 aaPredicted RBP12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 ASAP2O43150 1006 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 FOXD2O60548 495 aaPredicted RBP12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 EPN2O95208 641 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 EDN1P05305 212 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 GNA11P29992 359 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 ARL2P36404 184 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 RFC5P40937 340 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 QARSP47897 775 aaKnown RBP12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 SPIRE1Q08AE8 756 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 EMC2Q15006 297 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 LRSAM1Q6UWE0 723 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 DHX32Q7L7V1 743 aaKnown RBP12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 WDR5BQ86VZ2 330 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 C4orf19Q8IY42 314 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 C3orf58Q8NDZ4 430 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 CEP170P1Q96L14 293 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 TRMT61BQ9BVS5 477 aaKnown RBP12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 APOL6Q9BWW8 343 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 BACE2Q9Y5Z0 518 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 PIAS3Q9Y6X2 628 aa12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 PDCD11Q14690 1871 aaKnown RBP12.42□□□□□ -0.42
SUPT4H1-203ENST00000579289 TMEM189-UBE2V1I3L0A0 370 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 NR1I2O75469 434 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 SEC24AO95486 1093 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 SPINK2P20155 84 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 CCNE1P24864 410 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 VIPR2P41587 438 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 RING1Q06587 406 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 CCINQ13939 588 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 SLC8B1Q6J4K2 584 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 PKN3Q6P5Z2 889 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 MOXD1Q6UVY6 613 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 SYNE3Q6ZMZ3 975 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 SLC7A3Q8WY07 619 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 HAS1Q92839 578 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 COL26A1Q96A83 441 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 CHFRQ96EP1 664 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 DDX27Q96GQ7 796 aaKnown RBP12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 LOXL4Q96JB6 756 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 LRRC3Q9BY71 257 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 SMOC1Q9H4F8 434 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 BRD9Q9H8M2 597 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 RGL1Q9NZL6 768 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 VPS54Q9P1Q0 977 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 CDY1Q9Y6F8 540 aa12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 ASH1LQ9NR48 2969 aaKnown RBP12.41□□□□□ -0.42
SUPT4H1-203ENST00000579289 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 TAF4O00268 1085 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 AXIN1O15169 862 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 NPTXRO95502 500 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 P4HBP07237 508 aaKnown RBP12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 PTPN2P17706 415 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 PSMC3P17980 439 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 GLRA2P23416 452 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 GDI1P31150 447 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 SOX9P48436 509 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 EPHA5P54756 1037 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 RNF20Q5VTR2 975 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 IL31Q6EBC2 164 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 SLC27A1Q6PCB7 646 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 KBTBD6Q86V97 674 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 CEP57Q86XR8 500 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 MFSD6LQ8IWD5 586 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 HS6ST3Q8IZP7 471 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 IRF7Q92985 503 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 ZFP14Q9HCL3 533 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 CEP72Q9P209 647 aa12.4□□□□□ -0.42
SUPT4H1-203ENST00000579289 SPAG17Q6Q759 2223 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 MYBPHLA2RUH7 354 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 SOBPA7XYQ1 873 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 ERLIN2O94905 339 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 CPA1P15085 419 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 TKTP29401 623 aaKnown RBP12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 ROR1Q01973 937 aa12.39□□□□□ -0.43
SUPT4H1-203ENST00000579289 FCHO2Q0JRZ9 810 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms