RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KIAA0319LQ8IZA0 1049 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 LRRN4CLQ8ND94 238 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 ENGASEQ8NFI3 743 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 FBLIM1Q8WUP2 373 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 SCG3Q8WXD2 468 aaKnown RBP4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 BSNDQ8WZ55 320 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 KCNN1Q92952 543 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 TNPO1Q92973 898 aaKnown RBP4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 EPSTI1Q96J88 318 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 C20orf173Q96LM9 149 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 AK8Q96MA6 479 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 FIZ1Q96SL8 496 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 SH2D3AQ9BRG2 576 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 KATNAL1Q9BW62 490 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 SEZ6LQ9BYH1 1024 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 GOLPH3LQ9H4A5 285 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 SPC25Q9HBM1 224 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 GDPD2Q9HCC8 539 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 CYP4F12Q9HCS2 524 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 SETD4Q9NVD3 440 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 LRWD1Q9UFC0 647 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 DBR1Q9UK59 544 aaKnown RBP4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 PCDHA7Q9UN72 937 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 PCDHA2Q9Y5H9 948 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 PLXNA3P51805 1871 aa4.23□□□□□ -1.73
SMARCE1-215ENST00000578995 MROH7Q68CQ1 1323 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ADGRA3Q8IWK6 1321 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 KDM3AQ9Y4C1 1321 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 OBSL1O75147 1896 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 MYO9BQ13459 2157 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 SMIM35A0A1B0GVV1 85 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 C17orf102A2RUQ5 167 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 RRN3P2A6NIE6 340 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 E9PMD0 336 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ZEB2O60315 1214 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 PQBP1O60828 265 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CUTAO60888 179 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 NBNO60934 754 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 GPR32O75388 356 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 BAG4O95429 457 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 EYA4O95677 639 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CHRNA1P02708 482 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CXCL10P02778 98 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 HSP90AA1P07900 732 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CLTBP09497 229 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CKBP12277 381 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 XRCC6P12956 609 aaKnown RBP eCLIP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 PLCG1P19174 1290 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 EPHA1P21709 976 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 KLRC1P26715 233 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 YWHABP31946 246 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ARL2P36404 184 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 NLRP12P59046 1061 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CEBPZQ03701 1054 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 EHHADHQ08426 723 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 PPFIA1Q13136 1202 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 SNW1Q13573 536 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 GNL2Q13823 731 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 KARSQ15046 597 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 KCNMB1Q16558 191 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 PTGISQ16647 500 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ZNF484Q5JVG2 852 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ZNF618Q5T7W0 954 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 RASIP1Q5U651 963 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 FAM160B1Q5W0V3 765 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CNNM4Q6P4Q7 775 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 DTHD1Q6ZMT9 781 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 C1orf186Q6ZWK4 172 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CABP7Q86V35 215 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 C7orf61Q8IZ16 206 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 TSEN2Q8NCE0 465 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 SMG8Q8ND04 991 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 KCNG4Q8TDN1 519 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ASAP3Q8TDY4 903 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 SNX29Q8TEQ0 813 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 PIGOQ8TEQ8 1089 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 LINC01599Q8WXQ3 324 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 GLG1Q92896 1179 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 GATA6Q92908 595 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ATP6V0A1Q93050 837 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 DNAJC19Q96DA6 116 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 FAM167AQ96KS9 214 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ZNF396Q96N95 335 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 GDF15Q99988 308 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ADAMTS10Q9H324 1103 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 TMPRSS5Q9H3S3 457 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ZSWIM4Q9H7M6 989 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 SUGCTQ9HAC7 445 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 IFT122Q9HBG6 1241 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CYP26B1Q9NR63 512 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ANKEF1Q9NU02 776 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 DDX19AQ9NUU7 478 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 CHMP5Q9NZZ3 219 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 KLK14Q9P0G3 267 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 TUBE1Q9UJT0 475 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ZNF215Q9UL58 517 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 ATP11BQ9Y2G3 1177 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 GREB1Q4ZG55 1949 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 DENND4CQ5VZ89 1909 aa4.22□□□□□ -1.73
SMARCE1-215ENST00000578995 SZT2Q5T011 3432 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms