RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 SMARCE1Q969G3 411 aa23.62■■□□□ 1.37
CDC42EP4-203ENST00000578516 KIF12Q96FN5 646 aa23.62■■□□□ 1.37
CDC42EP4-203ENST00000578516 TMEM169Q96HH4 297 aa23.62■■□□□ 1.37
CDC42EP4-203ENST00000578516 GBP4Q96PP9 640 aa23.62■■□□□ 1.37
CDC42EP4-203ENST00000578516 KCTD10Q9H3F6 313 aa23.62■■□□□ 1.37
CDC42EP4-203ENST00000578516 HSPBP1Q9NZL4 362 aa23.62■■□□□ 1.37
CDC42EP4-203ENST00000578516 MAN1B1Q9UKM7 699 aa23.62■■□□□ 1.37
CDC42EP4-203ENST00000578516 BIN1O00499 593 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 GARTP22102 1010 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 CLCNKBP51801 687 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 PSMD2Q13200 908 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 KNOP1Q1ED39 458 aaKnown RBP23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 TCEAL5Q5H9L2 206 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 SCARA3Q6AZY7 606 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 EFCAB13Q8IY85 973 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 RSPH1Q8WYR4 309 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 CCDC47Q96A33 483 aaKnown RBP23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 TLR9Q9NR96 1032 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 BRWD1Q9NSI6 2320 aa23.61■■□□□ 1.37
CDC42EP4-203ENST00000578516 I3L4J1 428 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 PPEF2O14830 753 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 ALDH2P05091 517 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 POU3F3P20264 500 aaPredicted RBP23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 HSP90AA2PQ14568 343 aaPredicted RBP23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 CD300LGQ6UXG3 332 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 VPS52Q8N1B4 723 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 SPATA20Q8TB22 786 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 GPT2Q8TD30 523 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 TCF25Q9BQ70 676 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 GPR62Q9BZJ7 368 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 TSC2P49815 1807 aa23.6■■□□□ 1.37
CDC42EP4-203ENST00000578516 HIDE1A8MVS5 230 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 FSCN2O14926 492 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 PTPROQ16827 1216 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 LMBRD2Q68DH5 695 aaPredicted RBP23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 BRSK2Q8IWQ3 736 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 GPD1LQ8N335 351 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 RDH13Q8NBN7 331 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 LMAN2LQ9H0V9 348 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 ZBP1Q9H171 429 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 ENTPD7Q9NQZ7 604 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 PTPRJQ12913 1337 aa23.59■■□□□ 1.37
CDC42EP4-203ENST00000578516 EXTL3O43909 919 aa23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 BMP6P22004 513 aa23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 CA8P35219 290 aa23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 BRCC3P46736 316 aa23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 RBM10P98175 930 aaKnown RBP23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 FUT10Q6P4F1 479 aa23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 RBM23Q86U06 439 aaKnown RBP23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 CCDC34Q96HJ3 373 aa23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 PDE11AQ9HCR9 933 aa23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 RBAKQ9NYW8 714 aaPredicted RBP23.58■■□□□ 1.37
CDC42EP4-203ENST00000578516 PODXLO00592 558 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 PER2O15055 1255 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 SMC2O95347 1197 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 EFEMP2O95967 443 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 CD44P16070 742 aaKnown RBP23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 PRCPP42785 496 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 KRT17Q04695 432 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 UBE3AQ05086 875 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 ZBTB6Q15916 424 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 HS2ST1Q7LGA3 356 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 DDX53Q86TM3 631 aaKnown RBP23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 MICAL1Q8TDZ2 1067 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 COLEC11Q9BWP8 271 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 NSUN3Q9H649 340 aaKnown RBP23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 PLEKHA5Q9HAU0 1116 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 ADAM28Q9UKQ2 775 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 LZTS1Q9Y250 596 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 COL6A3P12111 3177 aa23.57■■□□□ 1.36
CDC42EP4-203ENST00000578516 C2CD2LO14523 706 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 LINC01565O15544 149 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 SLC34A2O95436 690 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 CASP4P49662 377 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 HYAL1Q12794 435 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 TMEM132DQ14C87 1099 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 KYAT1Q16773 422 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 UPP1Q16831 310 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 TIGD5Q53EQ6 642 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 ZNF658Q5TYW1 1059 aaPredicted RBP23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 TMC7Q7Z402 723 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 RNF168Q8IYW5 571 aaPredicted RBP23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 GSDMAQ96QA5 445 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 HERC2P3Q9BVR0 1158 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 CLSTN2Q9H4D0 955 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 LMCD1Q9NZU5 365 aa23.56■■□□□ 1.36
CDC42EP4-203ENST00000578516 TRIM49BA6NDI0 452 aa23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 NR3C1P04150 777 aa23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 PMS1P54277 932 aaKnown RBP23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 SKIV2LQ15477 1246 aaKnown RBP23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 GUF1Q8N442 669 aaKnown RBP23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 PLEKHO2Q8TD55 490 aa23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 EEF2KMTQ96G04 330 aa23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 IGFLR1Q9H665 355 aa23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 SLC38A7Q9NVC3 462 aa23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 RMND1Q9NWS8 449 aa23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 PUF60Q9UHX1 559 aaKnown RBP23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 HOOK1Q9UJC3 728 aaKnown RBP23.55■■□□□ 1.36
CDC42EP4-203ENST00000578516 TADA2AO75478 443 aa23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 B3GAT3O94766 335 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms