RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SOX4Q06945 474 aaPredicted RBP21.06■□□□□ 0.96
SS18-208ENST00000577751 PTPN14Q15678 1187 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 ZBTB6Q15916 424 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 ENOX2Q16206 610 aaKnown RBP21.06■□□□□ 0.96
SS18-208ENST00000577751 UPP1Q16831 310 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 AAK1Q2M2I8 961 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 FUT10Q6P4F1 479 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 TAS1R1Q7RTX1 841 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 AUTS2Q8WXX7 1259 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 GPR62Q9BZJ7 368 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 CHST7Q9NS84 486 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 ANK1P16157 1881 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 TMEM189-UBE2V1I3L0A0 370 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 TADA2AO75478 443 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 KIF4AO95239 1232 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 GLP2RO95838 553 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 KCNA5P22460 613 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 CLCNKBP51801 687 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 DLX2Q07687 328 aaPredicted RBP21.05■□□□□ 0.96
SS18-208ENST00000577751 LEXMQ3ZCV2 418 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 TPRNQ4KMQ1 711 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 KIAA0319Q5VV43 1072 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 DCLRE1AQ6PJP8 1040 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 CD300LGQ6UXG3 332 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 CRELD2Q6UXH1 353 aaPredicted RBP21.05■□□□□ 0.96
SS18-208ENST00000577751 TMEM184AQ6ZMB5 413 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 KRBA2Q6ZNG9 492 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 SYCP3Q8IZU3 236 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 POMGNT1Q8WZA1 660 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 TSPAN18Q96SJ8 248 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 RPF1Q9H9Y2 349 aaKnown RBP21.05■□□□□ 0.96
SS18-208ENST00000577751 GOLGA2P5Q9HBQ8 144 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 CHMP5Q9NZZ3 219 aa21.05■□□□□ 0.96
SS18-208ENST00000577751 LACTBL1A8MY62 500 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 TBX10O75333 385 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 GARTP22102 1010 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 IGFBP6P24592 240 aaPredicted RBP21.04■□□□□ 0.96
SS18-208ENST00000577751 ACOT2P49753 483 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 DSG1Q02413 1049 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 PPP2R3AQ06190 1150 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 TJAP1Q5JTD0 557 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 CD302Q8IX05 232 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 GPR65Q8IYL9 337 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 FMR1NBQ8N0W7 255 aaPredicted RBP21.04■□□□□ 0.96
SS18-208ENST00000577751 VN1R2Q8NFZ6 395 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 DDX27Q96GQ7 796 aaKnown RBP21.04■□□□□ 0.96
SS18-208ENST00000577751 MRPL17Q9NRX2 175 aaKnown RBP21.04■□□□□ 0.96
SS18-208ENST00000577751 CLEC1BQ9P126 229 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 SSX2IPQ9Y2D8 614 aa21.04■□□□□ 0.96
SS18-208ENST00000577751 SF3B1O75533 1304 aaKnown RBP eCLIP21.04■□□□□ 0.964e-8■■■■■ 34.5
SS18-208ENST00000577751 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.03■□□□□ 0.96
SS18-208ENST00000577751 GOLGA6L4A6NEF3 574 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 CLASP2O75122 1294 aaKnown RBP21.03■□□□□ 0.96
SS18-208ENST00000577751 BMP1P13497 986 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 RPL9P32969 192 aaKnown RBP21.03■□□□□ 0.96
SS18-208ENST00000577751 KCNQ1P51787 676 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 C3orf58Q8NDZ4 430 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 ENGASEQ8NFI3 743 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.03■□□□□ 0.96
SS18-208ENST00000577751 HASPINQ8TF76 798 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 SCFD1Q8WVM8 642 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 C18orf25Q96B23 403 aaPredicted RBP21.03■□□□□ 0.96
SS18-208ENST00000577751 MSLNLQ96KJ4 702 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.03■□□□□ 0.96
SS18-208ENST00000577751 UBE4BO95155 1302 aa21.03■□□□□ 0.96
SS18-208ENST00000577751 H3BQ06 376 aaPredicted RBP21.02■□□□□ 0.96
SS18-208ENST00000577751 B3GAT3O94766 335 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 LDHAP00338 332 aaKnown RBP21.02■□□□□ 0.96
SS18-208ENST00000577751 URODP06132 367 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 GLUD2P49448 558 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 RBM10P98175 930 aaKnown RBP21.02■□□□□ 0.96
SS18-208ENST00000577751 SPAG1Q07617 926 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 PSMD2Q13200 908 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 SNW1Q13573 536 aaKnown RBP21.02■□□□□ 0.96
SS18-208ENST00000577751 BMT2Q1RMZ1 405 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 USP41Q3LFD5 358 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 KMT5BQ4FZB7 885 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 EP400NLQ6ZTU2 488 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 KLHL5Q96PQ7 755 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 CBWD1Q9BRT8 395 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 ASB7Q9H672 318 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 RXFP1Q9HBX9 757 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 SLC39A2Q9NP94 309 aa21.02■□□□□ 0.96
SS18-208ENST00000577751 VWA8A3KMH1 1905 aa21.02■□□□□ 0.95
SS18-208ENST00000577751 TGFB1I1O43294 461 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 CNPP09543 421 aaKnown RBP21.01■□□□□ 0.95
SS18-208ENST00000577751 PRR29P0C7W0 189 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 CYP3A5P20815 502 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 LRPAP1P30533 357 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 CA8P35219 290 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 NDUFV1P49821 464 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 DPYDQ12882 1025 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 ELAVL2Q12926 359 aaKnown RBP21.01■□□□□ 0.95
SS18-208ENST00000577751 STK4Q13043 487 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 ZSWIM2Q8NEG5 633 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 KIF12Q96FN5 646 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 TUBGCP4Q9UGJ1 667 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 UBQLN1Q9UMX0 589 aaKnown RBP21.01■□□□□ 0.95
SS18-208ENST00000577751 DERAQ9Y315 318 aa21.01■□□□□ 0.95
SS18-208ENST00000577751 HCFC2Q9Y5Z7 792 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms