RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 CRELD2Q6UXH1 353 aaPredicted RBP17.09■□□□□ 0.33
NCBP3-207ENST00000577169 NELFCDQ8IXH7 590 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 ZSWIM2Q8NEG5 633 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 SCFD1Q8WVM8 642 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
NCBP3-207ENST00000577169 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 UBE2ZQ9H832 354 aaPredicted RBP17.09■□□□□ 0.33
NCBP3-207ENST00000577169 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 EXOC1Q9NV70 894 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 SLC38A7Q9NVC3 462 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 THEGQ9P2T0 379 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 STK39Q9UEW8 545 aa17.09■□□□□ 0.33
NCBP3-207ENST00000577169 SOD2P04179 222 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 GARTP22102 1010 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 PPP2R3AQ06190 1150 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 STK4Q13043 487 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 COL19A1Q14993 1142 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 ZBTB6Q15916 424 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 DUSP6Q16828 381 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 UPP1Q16831 310 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 CTC1Q2NKJ3 1217 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 FUT10Q6P4F1 479 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 CD300LGQ6UXG3 332 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 RNF168Q8IYW5 571 aaPredicted RBP17.08■□□□□ 0.32
NCBP3-207ENST00000577169 SAAL1Q96ER3 474 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 KIF12Q96FN5 646 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
NCBP3-207ENST00000577169 UROC1Q96N76 676 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 CBWD1Q9BRT8 395 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 HERC2P3Q9BVR0 1158 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 CDH23Q9H251 3354 aa17.08■□□□□ 0.32
NCBP3-207ENST00000577169 GOLGA8IPA6NC78 632 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 GOLGA8JA6NMD2 632 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 TGFB1I1O43294 461 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 LILRB3O75022 631 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 B3GAT3O94766 335 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 KIF4AO95239 1232 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 LDHAP00338 332 aaKnown RBP17.07■□□□□ 0.32
NCBP3-207ENST00000577169 LTBRP36941 435 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 MRPS5P82675 430 aaKnown RBP17.07■□□□□ 0.32
NCBP3-207ENST00000577169 FAM160A1Q05DH4 1040 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 KIAA0319Q5VV43 1072 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 ARMCX5Q6P1M9 558 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 CD302Q8IX05 232 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 TMEM130Q8N3G9 435 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 EFHBQ8N7U6 833 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
NCBP3-207ENST00000577169 IPO9Q96P70 1041 aaKnown RBP17.07■□□□□ 0.32
NCBP3-207ENST00000577169 CDCA3Q99618 268 aaPredicted RBP17.07■□□□□ 0.32
NCBP3-207ENST00000577169 FAM213AQ9BRX8 229 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 IRAK3Q9Y616 596 aa17.07■□□□□ 0.32
NCBP3-207ENST00000577169 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 C2CD2LO14523 706 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 CLASP2O75122 1294 aaKnown RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 KCNA5P22460 613 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 RPL9P32969 192 aaKnown RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 RBM10P98175 930 aaKnown RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 POU5F1Q01860 360 aaKnown RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 DLX2Q07687 328 aaPredicted RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 PTPN14Q15678 1187 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 USP41Q3LFD5 358 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 JADE1Q6IE81 842 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 KIAA1841Q6NSI8 718 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 KIAA0895Q8NCT3 520 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 NOC3LQ8WTT2 800 aaKnown RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 CCDC34Q96HJ3 373 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 B3GALT6Q96L58 329 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 KLHL5Q96PQ7 755 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 TSPAN18Q96SJ8 248 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 MRPL17Q9NRX2 175 aaKnown RBP17.06■□□□□ 0.32
NCBP3-207ENST00000577169 CHST7Q9NS84 486 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 TUBGCP4Q9UGJ1 667 aa17.06■□□□□ 0.32
NCBP3-207ENST00000577169 PDCD11Q14690 1871 aaKnown RBP17.05■□□□□ 0.32
NCBP3-207ENST00000577169 TRANK1O15050 2925 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 UBE4BO95155 1302 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 TMEM189-UBE2V1I3L0A0 370 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 TULP1O00294 542 aaPredicted RBP17.05■□□□□ 0.32
NCBP3-207ENST00000577169 PODXLO00592 558 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 CLIC2O15247 247 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 EXTL3O43909 919 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 RHOBTB3O94955 611 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 URODP06132 367 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 BRCC3P46736 316 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 GLUD2P49448 558 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 DSG1Q02413 1049 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 PNOCQ13519 176 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
NCBP3-207ENST00000577169 BMT2Q1RMZ1 405 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 FAM171A1Q5VUB5 890 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 CEP57Q86XR8 500 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 C3orf58Q8NDZ4 430 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 TIGD1Q96MW7 591 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 ASB2Q96Q27 587 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 ASB7Q9H672 318 aa17.05■□□□□ 0.32
NCBP3-207ENST00000577169 UBQLN1Q9UMX0 589 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms