RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
CDC27-219ENST00000576484 C11orf54Q9H0W9 315 aaPredicted RBP6.43□□□□□ -1.38
CDC27-219ENST00000576484 CALCOCO1Q9P1Z2 691 aa6.43□□□□□ -1.38
CDC27-219ENST00000576484 MARCH6O60337 910 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 SBK3P0C264 359 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 U2AF1L5P0DN76 240 aaPredicted RBP6.42□□□□□ -1.38
CDC27-219ENST00000576484 MYBP10242 640 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 MALP21145 153 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 MAN2A2P49641 1150 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 U2AF1Q01081 240 aaKnown RBP eCLIP6.42□□□□□ -1.38
CDC27-219ENST00000576484 NOGQ13253 232 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 CRHR2Q13324 411 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 PRKD1Q15139 912 aaPredicted RBP6.42□□□□□ -1.38
CDC27-219ENST00000576484 MINDY4Q4G0A6 757 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 METTL24Q5JXM2 366 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 ATXN7L2Q5T6C5 722 aaPredicted RBP6.42□□□□□ -1.38
CDC27-219ENST00000576484 NAIF1Q69YI7 327 aaPredicted RBP6.42□□□□□ -1.38
CDC27-219ENST00000576484 UBE3BQ7Z3V4 1068 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 SPRED1Q7Z699 444 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 SYT12Q8IV01 421 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 GSPT2Q8IYD1 628 aaKnown RBP6.42□□□□□ -1.38
CDC27-219ENST00000576484 ZBTB34Q8NCN2 500 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 OR10H5Q8NGA6 315 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 TTC8Q8TAM2 541 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 PPP1R35Q8TAP8 253 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 MNTQ99583 582 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 ACO2Q99798 780 aaKnown RBP6.42□□□□□ -1.38
CDC27-219ENST00000576484 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 FBXO34Q9NWN3 711 aa6.42□□□□□ -1.38
CDC27-219ENST00000576484 TCRBV7S2A1N4TA0A589 114 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 SLC16A6O15403 523 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 CD1AP06126 327 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 ATF3P18847 181 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 ACRV1P26436 265 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 HK3P52790 923 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 SNAPC2Q13487 334 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 RRP1BQ14684 758 aaKnown RBP6.41□□□□□ -1.38
CDC27-219ENST00000576484 SPDYAQ5MJ70 313 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 DACT2Q5SW24 774 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 EFCAB12Q6NXP0 572 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 DRICH1Q6PGQ1 229 aaPredicted RBP6.41□□□□□ -1.38
CDC27-219ENST00000576484 DENND1CQ8IV53 801 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 C3orf20Q8ND61 904 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 ZFP28Q8NHY6 868 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 C1GALT1C1Q96EU7 318 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 CDK5RAP1Q96SZ6 601 aaKnown RBP6.41□□□□□ -1.38
CDC27-219ENST00000576484 CGRRF1Q99675 332 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 NDC1Q9BTX1 674 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 PCDHA3Q9Y5H8 950 aa6.41□□□□□ -1.38
CDC27-219ENST00000576484 VSTM5A8MXK1 200 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 NT5C1B-RDH14C9J2C7 533 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 H3BML4 177 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 KIAA0391O15091 583 aaKnown RBP6.4□□□□□ -1.38
CDC27-219ENST00000576484 GRM6O15303 877 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 SLC6A4P31645 630 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 PTTG1IPP53801 180 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 CREMQ03060 361 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 THEMIS2Q5TEJ8 643 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 SLC4A10Q6U841 1118 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 CAMKK1Q8N5S9 505 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 KMT5AQ9NQR1 393 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 POGKQ9P215 609 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 GABBR1Q9UBS5 961 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 CLCA2Q9UQC9 943 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 POLHQ9Y253 713 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 TSC22D4Q9Y3Q8 395 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 NR2E3Q9Y5X4 410 aa6.4□□□□□ -1.38
CDC27-219ENST00000576484 GRXCR1A8MXD5 290 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 GOLGA6L6A8MZA4 724 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 F2RL2O00254 374 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 LEFTY2O00292 366 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 UBXN7O94888 489 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 AMHP03971 560 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 SLC6A2P23975 617 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 APOBEC3AP31941 199 aaPredicted RBP6.39□□□□□ -1.39
CDC27-219ENST00000576484 CHN2P52757 468 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 CNGB1Q14028 1251 aaPredicted RBP6.39□□□□□ -1.39
CDC27-219ENST00000576484 ATP2B3Q16720 1220 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 GFOD2Q3B7J2 385 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 PABPC1LQ4VXU2 614 aaKnown RBP6.39□□□□□ -1.39
CDC27-219ENST00000576484 OVCH2Q7RTZ1 564 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 HEATR3Q7Z4Q2 680 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 NEU1Q99519 415 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 LRFN3Q9BTN0 628 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 LMBRD1Q9NUN5 540 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 ABCF2Q9UG63 623 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 DDX20Q9UHI6 824 aaKnown RBP6.39□□□□□ -1.39
CDC27-219ENST00000576484 MYRFQ9Y2G1 1151 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 STXBP5LQ9Y2K9 1186 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 TESMINQ9Y4I5 508 aa6.39□□□□□ -1.39
CDC27-219ENST00000576484 GOLGA6CA6NDK9 693 aa6.38□□□□□ -1.39
CDC27-219ENST00000576484 GOLGA6BA6NDN3 693 aa6.38□□□□□ -1.39
CDC27-219ENST00000576484 DRGXA6NNA5 263 aa6.38□□□□□ -1.39
CDC27-219ENST00000576484 ERC2O15083 957 aa6.38□□□□□ -1.39
CDC27-219ENST00000576484 B3GALT2O43825 422 aa6.38□□□□□ -1.39
CDC27-219ENST00000576484 CTNND1O60716 968 aaKnown RBP6.38□□□□□ -1.39
CDC27-219ENST00000576484 POMCP01189 267 aa6.38□□□□□ -1.39
CDC27-219ENST00000576484 ITGB1P05556 798 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms