RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 NT5DC4Q86YG4 428 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 COLGALT2Q8IYK4 626 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 COLGALT1Q8NBJ5 622 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 LRCH3Q96II8 777 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 ZNF558Q96NG5 402 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 FNBP1Q96RU3 617 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 C17orf80Q9BSJ5 609 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 DNAJB4Q9UDY4 337 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 MTUS1Q9ULD2 1270 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 UBQLN1Q9UMX0 589 aaKnown RBP15.17■□□□□ 0.02
RPAIN-217ENST00000575711 C2CD2Q9Y426 696 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 MAPK13O15264 365 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 AKAP3O75969 853 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 FGFR1OPO95684 399 aaKnown RBP15.16■□□□□ 0.02
RPAIN-217ENST00000575711 GALTP07902 379 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 NFICP08651 508 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 EPB41P11171 864 aaKnown RBP15.16■□□□□ 0.02
RPAIN-217ENST00000575711 ERCC5P28715 1186 aaPredicted RBP15.16■□□□□ 0.02
RPAIN-217ENST00000575711 PSMC2P35998 433 aaKnown RBP15.16■□□□□ 0.02
RPAIN-217ENST00000575711 BMPR1AP36894 532 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 OR1G1P47890 313 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 CASP4P49662 377 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 TYRO3Q06418 890 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 PSMD6Q15008 389 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 NAB2Q15742 525 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 EPC2Q52LR7 807 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 ZNF697Q5TEC3 545 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 KCNT2Q6UVM3 1135 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 ZC3H3Q8IXZ2 948 aaKnown RBP15.16■□□□□ 0.02
RPAIN-217ENST00000575711 FAM186BQ8IYM0 893 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 CSGALNACT2Q8N6G5 542 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 BEST2Q8NFU1 509 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 EEF2KMTQ96G04 330 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 MFSD14AQ96MC6 490 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 CEP63Q96MT8 703 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 UROC1Q96N76 676 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 PLVAPQ9BX97 442 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 ZNF576Q9H609 170 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 PDE11AQ9HCR9 933 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 FAN1Q9Y2M0 1017 aa15.16■□□□□ 0.02
RPAIN-217ENST00000575711 LAMA3Q16787 3333 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 GBF1Q92538 1859 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 SYCE3A1L190 88 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 CASTOR2A6NHX0 329 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 SLC16A3O15427 465 aaKnown RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 B4GALT3O60512 393 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 RB1P06400 928 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 CCDC192P0DO97 292 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 DLATP10515 647 aaKnown RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 KRT13P13646 458 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 CYP3A5P20815 502 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 PPM1AP35813 382 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 PBX3P40426 434 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 SLC11A1P49279 550 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 TFAMQ00059 246 aaKnown RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 ZBTB6Q15916 424 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 TPD52L1Q16890 204 aaPredicted RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 ZSCAN23Q3MJ62 389 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 INTS8Q75QN2 995 aaKnown RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 SPRED2Q7Z698 418 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 USP37Q86T82 979 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 EFCAB13Q8IY85 973 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 FBXO22Q8NEZ5 403 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 CACTINQ8WUQ7 758 aaKnown RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 ARNTL2Q8WYA1 636 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 C18orf25Q96B23 403 aaPredicted RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 CCDC127Q96BQ5 260 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 DDX27Q96GQ7 796 aaKnown RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 DUSP9Q99956 384 aaKnown RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 COLEC11Q9BWP8 271 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 CERS4Q9HA82 394 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 TUBGCP4Q9UGJ1 667 aa15.15■□□□□ 0.02
RPAIN-217ENST00000575711 PRG3Q9Y2Y8 225 aaPredicted RBP15.15■□□□□ 0.02
RPAIN-217ENST00000575711 NT5C1B-RDH14C9J2C7 533 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 C5orf67F2Z3F1 127 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 NRP1O14786 923 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 TMEM191BP0C7N4 346 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 TNNI1P19237 187 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 RPL9P32969 192 aaKnown RBP15.14■□□□□ 0.01
RPAIN-217ENST00000575711 WNT7BP56706 349 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 SOX4Q06945 474 aaPredicted RBP15.14■□□□□ 0.01
RPAIN-217ENST00000575711 SPATA1Q5VX52 437 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 GPR153Q6NV75 609 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 FILIP1Q7Z7B0 1213 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 WDR49Q8IV35 697 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 SLC39A11Q8N1S5 342 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 TMC2Q8TDI7 906 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 ANKRD36BP1Q96IX9 119 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 CGRRF1Q99675 332 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 C11orf84Q9BUA3 381 aaPredicted RBP15.14■□□□□ 0.01
RPAIN-217ENST00000575711 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
RPAIN-217ENST00000575711 GOLGA2P5Q9HBQ8 144 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 SPG21Q9NZD8 308 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 LAMA2P24043 3122 aaKnown RBP15.14■□□□□ 0.01
RPAIN-217ENST00000575711 RALGAPA2Q2PPJ7 1873 aa15.14■□□□□ 0.01
RPAIN-217ENST00000575711 PODXLO00592 558 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 CITO14578 2027 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 FGF18O76093 207 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 GNA14O95837 355 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms