RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TMEM189-UBE2V1I3L0A0 370 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 ZBTB39O15060 712 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 B3GAT3O94766 335 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 LRG1P02750 347 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 CXCL12P48061 93 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 MLLT6P55198 1093 aaPredicted RBP9.94□□□□□ -0.82
SMG6-218ENST00000575454 SPEM2Q0P670 501 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 CSRP2Q16527 193 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 PPM1JQ5JR12 505 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 CYP4A22Q5TCH4 519 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 TANGO2Q6ICL3 276 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 MCPH1Q8NEM0 835 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 ING5Q8WYH8 240 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 FAM3CQ92520 227 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 MSANTD3Q96H12 275 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 YTHDC1Q96MU7 727 aaKnown RBP9.94□□□□□ -0.82
SMG6-218ENST00000575454 EIF2AK1Q9BQI3 630 aaKnown RBP9.94□□□□□ -0.82
SMG6-218ENST00000575454 POLR3FQ9H1D9 316 aaPredicted RBP9.94□□□□□ -0.82
SMG6-218ENST00000575454 C2orf40Q9H1Z8 148 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 FZD8Q9H461 694 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 PARD6AQ9NPB6 346 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 HCFC1R1Q9NWW0 138 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 SNTG2Q9NY99 539 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 PCDHA12Q9UN75 941 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 CDY1Q9Y6F8 540 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 SPEGQ15772 3267 aa9.94□□□□□ -0.82
SMG6-218ENST00000575454 ASPMQ8IZT6 3477 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.93□□□□□ -0.82
SMG6-218ENST00000575454 ARHGEF37A1IGU5 675 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 LRRIQ4A6NIV6 560 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 PRRG1O14668 218 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 PTGESO14684 152 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 ADAM12O43184 909 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 REC8O95072 547 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 TDGF1P13385 188 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 PSMC3P17980 439 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 RARRES1P49788 294 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 PRPF4BQ13523 1007 aaKnown RBP9.93□□□□□ -0.82
SMG6-218ENST00000575454 SIM2Q14190 667 aaPredicted RBP9.93□□□□□ -0.82
SMG6-218ENST00000575454 MAPK6Q16659 721 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 DCAF4L1Q3SXM0 396 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 CDCA2Q69YH5 1023 aaPredicted RBP9.93□□□□□ -0.82
SMG6-218ENST00000575454 IQCEQ6IPM2 695 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 PRR23BQ6ZRT6 265 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 PIK3AP1Q6ZUJ8 805 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 RUFY3Q7L099 469 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 CDR2LQ86X02 465 aaPredicted RBP9.93□□□□□ -0.82
SMG6-218ENST00000575454 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 ZNF687Q8N1G0 1237 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 ELMOD1Q8N336 334 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 LEMD2Q8NC56 503 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 ZNF461Q8TAF7 563 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 DEPDC1BQ8WUY9 529 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 E2F7Q96AV8 911 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
SMG6-218ENST00000575454 LMAN1LQ9HAT1 526 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 SEMA4GQ9NTN9 838 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 MAFFQ9ULX9 164 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 NDRG2Q9UN36 371 aaKnown RBP9.93□□□□□ -0.82
SMG6-218ENST00000575454 KCNJ14Q9UNX9 436 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 CYP46A1Q9Y6A2 500 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 LOXHD1Q8IVV2 1947 aa9.93□□□□□ -0.82
SMG6-218ENST00000575454 H7C4K7 107 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 ACKR2O00590 384 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 ZNF263O14978 683 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 RECQL4O94761 1208 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 DMWDQ09019 674 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 LRRC32Q14392 662 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 NAB2Q15742 525 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 SLC5A9Q2M3M2 681 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 FAM78AQ5JUQ0 283 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 IL31Q6EBC2 164 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 SLC8B1Q6J4K2 584 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 PDZD4Q76G19 769 aaPredicted RBP9.92□□□□□ -0.82
SMG6-218ENST00000575454 TCEAL8Q8IYN2 117 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 SPEM1Q8N4L4 309 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 WASF1Q92558 559 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 SMARCD2Q92925 531 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 CORO1BQ9BR76 489 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 PLA2G2FQ9BZM2 168 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 GPR88Q9GZN0 384 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 PDZD7Q9H5P4 517 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 TRPV4Q9HBA0 871 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 ZSWIM6Q9HCJ5 1215 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 BRMS1Q9HCU9 246 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 ZNF334Q9HCZ1 680 aaPredicted RBP9.92□□□□□ -0.82
SMG6-218ENST00000575454 CACNG4Q9UBN1 327 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 ANGPTL2Q9UKU9 493 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.92□□□□□ -0.82
SMG6-218ENST00000575454 PIAS3Q9Y6X2 628 aa9.92□□□□□ -0.82
SMG6-218ENST00000575454 GCN1Q92616 2671 aaKnown RBP9.92□□□□□ -0.82
SMG6-218ENST00000575454 SHISA7A6NL88 538 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 SYN3O14994 580 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 EPB41L2O43491 1005 aaKnown RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 USO1O60763 962 aaKnown RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 ABLIM3O94929 683 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 PAPSS2O95340 614 aaPredicted RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 ATF2P15336 505 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 CEBPBP17676 345 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 ATP2B1P20020 1258 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms