RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 MIF4GDA9UHW6 222 aaKnown RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 GRIN3BO60391 1043 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 MTA2O94776 668 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 ITGA4P13612 1032 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 TNFSF9P41273 254 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 FAM193AP78312 1265 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 CCNA1P78396 465 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 UBL4BQ8N7F7 174 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 GTF3C2Q8WUA4 911 aaPredicted RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 CAVIN3Q969G5 261 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 NLRP4Q96MN2 994 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 C2orf40Q9H1Z8 148 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 FAN1Q9Y2M0 1017 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 PLXNB2O15031 1838 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 GOLGA6BA6NDN3 693 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 PDHXO00330 501 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 CYP1A2P05177 515 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 BPIFB4P59827 614 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 MKRN3Q13064 507 aaKnown RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 ZNF211Q13398 564 aaPredicted RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 CUL2Q13617 745 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 CLEC16AQ2KHT3 1053 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 BRSK2Q8IWQ3 736 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 CASKIN2Q8WXE0 1202 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 ALG3Q92685 438 aa15.06■□□□□ 0
VPS33B-208ENST00000574755 ZNF668Q96K58 619 aaPredicted RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 ACO2Q99798 780 aaKnown RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 APOBEC3GQ9HC16 384 aaKnown RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 ZC3H4Q9UPT8 1303 aaKnown RBP15.06■□□□□ 0
VPS33B-208ENST00000574755 HBP1O60381 514 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 GJB1P08034 283 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 COMTP21964 271 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 GGCXP38435 758 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 NOP14P78316 857 aaKnown RBP15.05■□□□□ 0
VPS33B-208ENST00000574755 NCOA4Q13772 614 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 NAA35Q5VZE5 725 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 ZNF677Q86XU0 584 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 FAM212AQ96EL1 285 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 IMPG2Q9BZV3 1241 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 UVRAGQ9P2Y5 699 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 CNOT8Q9UFF9 292 aaKnown RBP15.05■□□□□ 0
VPS33B-208ENST00000574755 AMACRQ9UHK6 382 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 ADAM21Q9UKJ8 722 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 EVPLQ92817 2033 aa15.05■□□□□ 0
VPS33B-208ENST00000574755 FAM189A1O60320 539 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 SYF2O95926 243 aaKnown RBP15.05■□□□□ -0
VPS33B-208ENST00000574755 ADORA2AP29274 412 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 TFDP1Q14186 410 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 MAP1SQ66K74 1059 aaPredicted RBP15.05■□□□□ -0
VPS33B-208ENST00000574755 EFCAB12Q6NXP0 572 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 ADAT2Q7Z6V5 191 aaKnown RBP15.05■□□□□ -0
VPS33B-208ENST00000574755 KRT35Q92764 455 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 ZBTB10Q96DT7 871 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 BTBD6Q96KE9 485 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 RPS6KC1Q96S38 1066 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 ZSWIM1Q9BR11 485 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 SLITRK6Q9H5Y7 841 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 ERAP1Q9NZ08 941 aa15.05■□□□□ -0
VPS33B-208ENST00000574755 INO80B-WBP1J3KQ70 363 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 OGTO15294 1046 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 SPOPO43791 374 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 CLTAP09496 248 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 POTEJP0CG39 1038 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 CETPP11597 493 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 UNGP13051 313 aaPredicted RBP15.04■□□□□ -0
VPS33B-208ENST00000574755 TBXAS1P24557 533 aaPredicted RBP15.04■□□□□ -0
VPS33B-208ENST00000574755 CLCN3P51790 818 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 NNTQ13423 1086 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 TRADDQ15628 312 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 GPR162Q16538 588 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 TMEM132AQ24JP5 1023 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 GJC2Q5T442 439 aaPredicted RBP15.04■□□□□ -0
VPS33B-208ENST00000574755 TMEM270Q6UE05 265 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 MAATS1Q7Z4T9 603 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 WDR49Q8IV35 697 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 CCDC26Q8TAB7 109 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 RIN2Q8WYP3 895 aaPredicted RBP15.04■□□□□ -0
VPS33B-208ENST00000574755 INO80BQ9C086 356 aaPredicted RBP15.04■□□□□ -0
VPS33B-208ENST00000574755 RNPEPQ9H4A4 650 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 NUB1Q9Y5A7 615 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 PCDHB4Q9Y5E5 795 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 GOLGA6L10A0A0M3HER8 536 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 RNF40O75150 1001 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 FAM153BP0C7A2 387 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 ACO1P21399 889 aaKnown RBP15.04■□□□□ -0
VPS33B-208ENST00000574755 MARCKSL1P49006 195 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 AP3M2P53677 418 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 IGBP1P78318 339 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 MCL1Q07820 350 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 HLTFQ14527 1009 aaKnown RBP eCLIP15.04■□□□□ -0
VPS33B-208ENST00000574755 CLUL1Q15846 466 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 FAM153CQ494X1 144 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 UBE2Q2Q8WVN8 375 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 CPA5Q8WXQ8 436 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 FAM153AQ9UHL3 310 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 IVNS1ABPQ9Y6Y0 642 aa15.04■□□□□ -0
VPS33B-208ENST00000574755 UMODL1Q5DID0 1318 aa15.03■□□□□ -0
VPS33B-208ENST00000574755 CCL15-CCL14A0A0B4J2E2 113 aa15.03■□□□□ -0
VPS33B-208ENST00000574755 AGPSO00116 658 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms