RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 INO80B-WBP1J3KQ70 363 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 HBP1O60381 514 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 SLC26A2P50443 739 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 GUCY2DQ02846 1103 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 SND1Q7KZF4 910 aaKnown RBP eCLIP11.23□□□□□ -0.61
USP43-205ENST00000574408 EXOC8Q8IYI6 725 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 BRI3BPQ8WY22 251 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 DDX1Q92499 740 aaKnown RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 MS4A4AQ96JQ5 239 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 FAM81BQ96LP2 452 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 JPH2Q9BR39 696 aaPredicted RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 INO80BQ9C086 356 aaPredicted RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 ACBD3Q9H3P7 528 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 EPB41L5Q9HCM4 733 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 TMEM59LQ9UK28 342 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 DIS3Q9Y2L1 958 aaKnown RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 ALG6Q9Y672 507 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 LOC102724159A0A0B4J2E5 919 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 KRIT1O00522 736 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 DDX3YO15523 660 aaKnown RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 RAD51CO43502 376 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 GTF2A2P52657 109 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 ARHGAP1Q07960 439 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 MESDQ14696 234 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 PWP2Q15269 919 aaKnown RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 BRSK2Q8IWQ3 736 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 ACO2Q99798 780 aaKnown RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 APOBEC3GQ9HC16 384 aaKnown RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 NOP14P78316 857 aaKnown RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 CUL2Q13617 745 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 ZNF792Q3KQV3 632 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 EFCAB12Q6NXP0 572 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 IFT20Q8IY31 132 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 NUP85Q9BW27 656 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 DDX47Q9H0S4 455 aaKnown RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 C2orf40Q9H1Z8 148 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 RNPEPQ9H4A4 650 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 ERAP1Q9NZ08 941 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 SIP14410 1827 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 SCN4AP35499 1836 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 FGGP02679 453 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 ITGA4P13612 1032 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 HADHBP55084 474 aaKnown RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 SF3A3Q12874 501 aaKnown RBP eCLIP11.22□□□□□ -0.61
USP43-205ENST00000574408 ZNF211Q13398 564 aaPredicted RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 NCOA4Q13772 614 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 TFDP1Q14186 410 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 DCAF12L1Q5VU92 463 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 NAA35Q5VZE5 725 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 C11orf63Q6NUN7 778 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 RASGEF1CQ8N431 466 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 ZNF564Q8TBZ8 553 aaPredicted RBP11.22□□□□□ -0.61
USP43-205ENST00000574408 IFT81Q8WYA0 676 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 GTF3C4Q9UKN8 822 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 HPCAL4Q9UM19 191 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 PCDHB4Q9Y5E5 795 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 UMODL1Q5DID0 1318 aa11.22□□□□□ -0.61
USP43-205ENST00000574408 OGTO15294 1046 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 LGALS2P05162 132 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 LAMC2Q13753 1193 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 CLEC16AQ2KHT3 1053 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 ACAD10Q6JQN1 1059 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 THNSL1Q8IYQ7 743 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 ALG3Q92685 438 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 BTBD6Q96KE9 485 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 CALR3Q96L12 384 aaKnown RBP11.21□□□□□ -0.61
USP43-205ENST00000574408 PCDHB2Q9Y5E7 798 aa11.21□□□□□ -0.61
USP43-205ENST00000574408 B4GALT5O43286 388 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 GRIN3BO60391 1043 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 GH1P01241 217 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 CLTAP09496 248 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 INSRRP14616 1297 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 ADCYAP1R1P41586 468 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 CARSP49589 748 aaKnown RBP11.21□□□□□ -0.62
USP43-205ENST00000574408 EPHB4P54760 987 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 OSTNP61366 133 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 SCARA3Q6AZY7 606 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 TMEM270Q6UE05 265 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 AFG1LQ8WV93 481 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 RNPC3Q96LT9 517 aaKnown RBP11.21□□□□□ -0.62
USP43-205ENST00000574408 PPP1R16BQ96T49 567 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 IMPG2Q9BZV3 1241 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 MTMR12Q9C0I1 747 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 CARD9Q9H257 536 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 VIPAS39Q9H9C1 493 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 GBA2Q9HCG7 927 aaPredicted RBP11.21□□□□□ -0.62
USP43-205ENST00000574408 GDF3Q9NR23 364 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.21□□□□□ -0.62
USP43-205ENST00000574408 CNOT8Q9UFF9 292 aaKnown RBP11.21□□□□□ -0.62
USP43-205ENST00000574408 NFU1Q9UMS0 254 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 NUB1Q9Y5A7 615 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 SART1O43290 800 aaKnown RBP11.21□□□□□ -0.62
USP43-205ENST00000574408 FAM189A1O60320 539 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 CYP1A2P05177 515 aa11.21□□□□□ -0.62
USP43-205ENST00000574408 COMTP21964 271 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms