RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 CXCL8P10145 99 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 TNFSF9P41273 254 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 MTHFRP42898 656 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 UPP1Q16831 310 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 SLC10A6Q3KNW5 377 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 ZBTB41Q5SVQ8 909 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 DCLRE1AQ6PJP8 1040 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 TMEM130Q8N3G9 435 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 C3orf58Q8NDZ4 430 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 UROC1Q96N76 676 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 NECTIN4Q96NY8 510 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 FIZ1Q96SL8 496 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 SLC38A7Q9NVC3 462 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 CNTN3Q9P232 1028 aa19.42■□□□□ 0.7
CTDNEP1-207ENST00000572043 TTC28Q96AY4 2481 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 PODXLO00592 558 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 TGM5O43548 720 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 RFPL2O75678 378 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 IDEP14735 1019 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 KCNE1P15382 129 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 COL9A1P20849 921 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 PSMD5Q16401 504 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 CD300LGQ6UXG3 332 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 GPR149Q86SP6 731 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 LNX1Q8TBB1 728 aaPredicted RBP19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 STAMQ92783 540 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 IKZF4Q9H2S9 585 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 TUBGCP4Q9UGJ1 667 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 MORC2Q9Y6X9 1032 aaPredicted RBP19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 MUC3AQ02505 3323 aa19.41■□□□□ 0.7
CTDNEP1-207ENST00000572043 CUL9Q8IWT3 2517 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 CCDC195A0A1B0GUA6 201 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 C2CD4DB7Z1M9 353 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 TISP43B9A030 160 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 TMEM189-UBE2V1I3L0A0 370 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 ADAM12O43184 909 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 CREMQ03060 361 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 ELAVL2Q12926 359 aaKnown RBP19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 HERC4Q5GLZ8 1057 aaPredicted RBP19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 SLC39A4Q6P5W5 647 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 PIK3R5Q8WYR1 880 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 FAM212AQ96EL1 285 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 DDX27Q96GQ7 796 aaKnown RBP19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 CLSTN3Q9BQT9 956 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 MSTO1Q9BUK6 570 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 FNIP2Q9P278 1114 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 NR2E1Q9Y466 385 aa19.4■□□□□ 0.7
CTDNEP1-207ENST00000572043 ANKRD63C9JTQ0 380 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 TULP1O00294 542 aaPredicted RBP19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 GPR37L1O60883 481 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 PPP6R2O75170 966 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 YEATS4O95619 227 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 CLTAP09496 248 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 TKTP29401 623 aaKnown RBP19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 GTF2BQ00403 316 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 MAP4K3Q8IVH8 894 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 DHX58Q96C10 678 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 DNAJC19Q96DA6 116 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 KIF12Q96FN5 646 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 MRPL44Q9H9J2 332 aaKnown RBP19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 NUB1Q9Y5A7 615 aa19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 TDRD15B5MCY1 1934 aaKnown RBP19.39■□□□□ 0.69
CTDNEP1-207ENST00000572043 PIGRP01833 764 aa19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 FGFR3P22607 806 aa19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 PPP2R3AQ06190 1150 aa19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 ELMSAN1Q6PJG2 1045 aa19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 ZNF720Q7Z2F6 126 aa19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 TDRD5Q8NAT2 981 aaKnown RBP19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 KREMEN2Q8NCW0 462 aa19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 KCNN1Q92952 543 aa19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 RPF1Q9H9Y2 349 aaKnown RBP19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 DPP7Q9UHL4 492 aa19.38■□□□□ 0.69
CTDNEP1-207ENST00000572043 A0A0B4J269 797 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 LACTBL1A8MY62 500 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 OGTO15294 1046 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 TRAPPC3O43617 180 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 CUTAO60888 179 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 GCNT3O95395 438 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 SCP2P22307 547 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 MCM4P33991 863 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 GUCY2FP51841 1108 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 DNM1Q05193 864 aaKnown RBP19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 ENOX2Q16206 610 aaKnown RBP19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 LILRA6Q6PI73 481 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 SHC4Q6S5L8 630 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 CCDC149Q6ZUS6 474 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 GPR65Q8IYL9 337 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 SMG7Q92540 1137 aaKnown RBP19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 PIDD1Q9HB75 910 aa19.37■□□□□ 0.69
CTDNEP1-207ENST00000572043 TTC26A0AVF1 554 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 FAM189A1O60320 539 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 PDIA4P13667 645 aaKnown RBP19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 GAP43P17677 238 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 RPL9P32969 192 aaKnown RBP19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 OR1D2P34982 312 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 ME1P48163 572 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 ACOT2P49753 483 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 CASP5P51878 434 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms