RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 HERC4Q5GLZ8 1057 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 RTP2Q5QGT7 225 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 PRSS55Q6UWB4 352 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 APBB1IPQ7Z5R6 666 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 GRAMD1CQ8IYS0 662 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 TRIM9Q9C026 710 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 BLZF1Q9H2G9 400 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 MRPL44Q9H9J2 332 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 MRPL17Q9NRX2 175 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 CNTN3Q9P232 1028 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 SERTAD1Q9UHV2 236 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 USP15Q9Y4E8 981 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 DOCK6Q96HP0 2047 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 TTC26A0AVF1 554 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 HNRNPDLO14979 420 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 OGTO15294 1046 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 TEX28O15482 410 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 ADAM12O43184 909 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 NR1I2O75469 434 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 B3GAT3O94766 335 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 GCNT3O95395 438 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 URODP06132 367 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 GAP43P17677 238 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 KLRC2P26717 231 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 AFMP43652 599 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 ACOT2P49753 483 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 CLCN4P51793 760 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 GUCY2FP51841 1108 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 WNT7BP56706 349 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 KRT85P78386 507 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 BECN1Q14457 450 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 BMS1Q14692 1282 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 ZBTB6Q15916 424 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 ENOX2Q16206 610 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 PUS10Q3MIT2 529 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 FAM171A1Q5VUB5 890 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 DCLRE1AQ6PJP8 1040 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 CRELD2Q6UXH1 353 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 CEP57Q86XR8 500 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 GLYCTKQ8IVS8 523 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 IQUBQ8NA54 791 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 LNX1Q8TBB1 728 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 RIN2Q8WYP3 895 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 SUSD6Q92537 303 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 CASP10Q92851 521 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 SPATA32Q96LK8 384 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 C7orf25Q9BPX7 421 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 MSTO1Q9BUK6 570 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 TNMDQ9H2S6 317 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 RXFP1Q9HBX9 757 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 TOPORSQ9NS56 1045 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 TUBGCP4Q9UGJ1 667 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 KCNH3Q9ULD8 1083 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 STYXL1Q9Y6J8 313 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 C5orf42Q9H799 3197 aa11.17□□□□□ -0.62
GTF3C1-213ENST00000571886 C2orf16Q68DN1 1984 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 TMEM189-UBE2V1I3L0A0 370 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 PODXLO00592 558 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 ACTN4O43707 911 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 ADRB2P07550 413 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 CLTAP09496 248 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 SPATA31D3P0C874 917 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 HOXD13P35453 343 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 ZP2Q05996 745 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 CUL4BQ13620 913 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 USP41Q3LFD5 358 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 RARS2Q5T160 578 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 SCARA3Q6AZY7 606 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 ADALQ6DHV7 355 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 KIAA1841Q6NSI8 718 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 RSPO2Q6UXX9 243 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 SPATA31D4Q6ZUB0 917 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 PALB2Q86YC2 1186 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 TMEM87AQ8NBN3 555 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 EMILIN2Q9BXX0 1053 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 CUEDC2Q9H467 287 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 OLFML3Q9NRN5 406 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 FAM13BQ9NYF5 915 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 SEL1LQ9UBV2 794 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 CPSF3Q9UKF6 684 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 HPSEQ9Y251 543 aa11.16□□□□□ -0.62
GTF3C1-213ENST00000571886 SF3B1O75533 1304 aaKnown RBP eCLIP11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 SCN1AP35498 2009 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 PPEF2O14830 753 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 PFKFB1P16118 471 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 SCP2P22307 547 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 FGFR3P22607 806 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 CMA1P23946 247 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 ASIC1P78348 528 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 EHHADHQ08426 723 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 CNNM4Q6P4Q7 775 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 LILRA6Q6PI73 481 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 ADHFE1Q8IWW8 467 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 CCDC65Q8IXS2 484 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 GJD3Q8N144 294 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms