RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CDC25AP30304 524 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 GRM5P41594 1212 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 PEX3P56589 373 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 UVSSAQ2YD98 709 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 POTEHQ6S545 545 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 KCNK18Q7Z418 384 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 DDX27Q96GQ7 796 aaKnown RBP19.29■□□□□ 0.68
CIITA-206ENST00000571190 ZMAT2Q96NC0 199 aaKnown RBP19.29■□□□□ 0.68
CIITA-206ENST00000571190 MMTAG2Q9BU76 263 aaKnown RBP19.29■□□□□ 0.68
CIITA-206ENST00000571190 RUSC1Q9BVN2 902 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 TMEM134Q9H6X4 195 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 ARHGAP28Q9P2N2 729 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 NOL7Q9UMY1 257 aaKnown RBP19.29■□□□□ 0.68
CIITA-206ENST00000571190 BACE2Q9Y5Z0 518 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 CCDC169A6NNP5 214 aa19.28■□□□□ 0.68
CIITA-206ENST00000571190 HIP1RO75146 1068 aa19.28■□□□□ 0.68
CIITA-206ENST00000571190 FAM184AQ8NB25 1140 aa19.28■□□□□ 0.68
CIITA-206ENST00000571190 UROC1Q96N76 676 aa19.28■□□□□ 0.68
CIITA-206ENST00000571190 TARS2Q9BW92 718 aaKnown RBP19.28■□□□□ 0.68
CIITA-206ENST00000571190 SH2B1Q9NRF2 756 aaPredicted RBP19.28■□□□□ 0.68
CIITA-206ENST00000571190 DAXXQ9UER7 740 aaPredicted RBP19.28■□□□□ 0.68
CIITA-206ENST00000571190 POLIQ9UNA4 740 aa19.28■□□□□ 0.68
CIITA-206ENST00000571190 CDY1Q9Y6F8 540 aa19.28■□□□□ 0.68
CIITA-206ENST00000571190 PHLPP2Q6ZVD8 1323 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 XYLBO75191 536 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 GLULP15104 373 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 PROZP22891 400 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 STARD6P59095 220 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 OSTNP61366 133 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 GNL2Q13823 731 aaKnown RBP19.27■□□□□ 0.68
CIITA-206ENST00000571190 RINT1Q6NUQ1 792 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 C1orf186Q6ZWK4 172 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 ADSSL1Q8N142 457 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 FOXQ1Q9C009 403 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 DNM3Q9UQ16 869 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 SIT1Q9Y3P8 196 aa19.27■□□□□ 0.68
CIITA-206ENST00000571190 TBC1D4O60343 1298 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 LRRN2O75325 713 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 ZNF568Q3ZCX4 644 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 SPECC1Q5M775 1068 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 SLC8B1Q6J4K2 584 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 ANKS3Q6ZW76 656 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 NPAS3Q8IXF0 933 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 SNX27Q96L92 541 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 CCDC94Q9BW85 323 aaPredicted RBP19.26■□□□□ 0.67
CIITA-206ENST00000571190 MRPL4Q9BYD3 311 aaKnown RBP19.26■□□□□ 0.67
CIITA-206ENST00000571190 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.26■□□□□ 0.67
CIITA-206ENST00000571190 STK24Q9Y6E0 443 aa19.26■□□□□ 0.67
CIITA-206ENST00000571190 SFI1A8K8P3 1242 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 TRAPPC3O43617 180 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 KCNE1P15382 129 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 PRPHP41219 470 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 ROR1Q01973 937 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 PABPC1LQ4VXU2 614 aaKnown RBP19.25■□□□□ 0.67
CIITA-206ENST00000571190 KRT79Q5XKE5 535 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 RTL10Q7L3V2 364 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 APBB1IPQ7Z5R6 666 aaPredicted RBP19.25■□□□□ 0.67
CIITA-206ENST00000571190 PJA1Q8NG27 643 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 ZBTB45Q96K62 511 aaPredicted RBP19.25■□□□□ 0.67
CIITA-206ENST00000571190 NTPCRQ9BSD7 190 aaKnown RBP19.25■□□□□ 0.67
CIITA-206ENST00000571190 DDX23Q9BUQ8 820 aaKnown RBP19.25■□□□□ 0.67
CIITA-206ENST00000571190 KMT5AQ9NQR1 393 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 KCNH3Q9ULD8 1083 aa19.25■□□□□ 0.67
CIITA-206ENST00000571190 PODXLO00592 558 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 SLC16A4O15374 487 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 ABLIM3O94929 683 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 MCF2P10911 925 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 RFX1P22670 979 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 YARSP54577 528 aaKnown RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 DMP1Q13316 513 aaPredicted RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 SNW1Q13573 536 aaKnown RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 MRPL58Q14197 206 aaKnown RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 SLC5A9Q2M3M2 681 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 VARS2Q5ST30 1063 aaKnown RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 MTSS1LQ765P7 747 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 MAML2Q8IZL2 1156 aaPredicted RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 ZNF461Q8TAF7 563 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 ING5Q8WYH8 240 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 C18orf25Q96B23 403 aaPredicted RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 KXD1Q9BQD3 176 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 RAB34Q9BZG1 259 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 TOPORSQ9NS56 1045 aaPredicted RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 CNTN3Q9P232 1028 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 RBM19Q9Y4C8 960 aaKnown RBP19.24■□□□□ 0.67
CIITA-206ENST00000571190 R4GN57 208 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 CFAP54Q96N23 3096 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 DMDP11532 3685 aa19.24■□□□□ 0.67
CIITA-206ENST00000571190 ARHGEF37A1IGU5 675 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 WDR27A2RRH5 827 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 LAD1O00515 517 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 RHOP08100 348 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 GUCY2CP25092 1073 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 SLC44A4Q53GD3 710 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 MPZL3Q6UWV2 235 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 C1orf210Q8IVY1 113 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 TMEM130Q8N3G9 435 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 DRC1Q96MC2 740 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 ACAP3Q96P50 834 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 PNMA5Q96PV4 448 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 PLA2G2FQ9BZM2 168 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms