RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 JCADQ9P266 1359 aa4.4□□□□□ -1.7
CDC27-211ENST00000570740 NHSL1Q5SYE7 1610 aa4.4□□□□□ -1.7
CDC27-211ENST00000570740 TRPM1Q7Z4N2 1603 aa4.4□□□□□ -1.7
CDC27-211ENST00000570740 A0A0G2JNJ9 132 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 GOLGA6L9A6NEM1 432 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 MATN2O00339 956 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 PLD2O14939 933 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 SLU7O95391 586 aaKnown RBP4.4□□□□□ -1.71
CDC27-211ENST00000570740 TUBBP07437 444 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CT47B1P0C2W7 299 aaPredicted RBP4.4□□□□□ -1.71
CDC27-211ENST00000570740 ZBTB48P10074 688 aaPredicted RBP4.4□□□□□ -1.71
CDC27-211ENST00000570740 VCAM1P19320 739 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CR2P20023 1033 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 HSPA1LP34931 641 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 RPS6KA3P51812 740 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 MRPL12P52815 198 aaKnown RBP4.4□□□□□ -1.71
CDC27-211ENST00000570740 GYS2P54840 703 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 SLC8A3P57103 927 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 TBR1Q16650 682 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 LONRF3Q496Y0 759 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CCDC38Q502W7 563 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 HHATQ5VTY9 493 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CCDC73Q6ZRK6 1079 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 MICALCLQ6ZW33 695 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 LARP4Q71RC2 724 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDC27-211ENST00000570740 BRINP3Q76B58 766 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CCDC80Q76M96 950 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 OTUD6AQ7L8S5 288 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 OTOP1Q7RTM1 612 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 OTOP2Q7RTS6 562 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 APBB1IPQ7Z5R6 666 aaPredicted RBP4.4□□□□□ -1.71
CDC27-211ENST00000570740 TADA2BQ86TJ2 420 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 FAM114A1Q8IWE2 563 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CCAR1Q8IX12 1150 aaKnown RBP4.4□□□□□ -1.71
CDC27-211ENST00000570740 FUKQ8N0W3 1084 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 C2orf69Q8N8R5 385 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 HIPK4Q8NE63 616 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 WDR48Q8TAF3 677 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 PRAM1Q96QH2 718 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 BAG1Q99933 345 aaPredicted RBP4.4□□□□□ -1.71
CDC27-211ENST00000570740 RWDD1Q9H446 243 aaPredicted RBP4.4□□□□□ -1.71
CDC27-211ENST00000570740 ZNF446Q9NWS9 450 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 Q9UFV3 132 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CDC42EP3Q9UKI2 254 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 NR2E1Q9Y466 385 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 PHLPP1O60346 1717 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CCDC171Q6TFL3 1326 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 CCDC7Q96M83 1385 aa4.4□□□□□ -1.71
CDC27-211ENST00000570740 SHPRHQ149N8 1683 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 ITSN1Q15811 1721 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 ARHGEF28Q8N1W1 1705 aaKnown RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 CCDC194A0A1B0GVG4 234 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 PRAMEF22A3QJZ6 481 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 IPO5O00410 1097 aaKnown RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 ERC2O15083 957 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 POLR3GO15318 223 aaPredicted RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 ARHGAP6O43182 974 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 EPB41L2O43491 1005 aaKnown RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 AKAP8O43823 692 aaKnown RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 HIP1RO75146 1068 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 HMMRO75330 724 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 PEX14O75381 377 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 MAFO75444 373 aaPredicted RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 RAD17O75943 681 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 ERLIN2O94905 339 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 C6P13671 934 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 TACR2P21452 398 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 MECP2P51608 486 aaKnown RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 PSMD7P51665 324 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 CCT2P78371 535 aaKnown RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 DEUP1Q05D60 604 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 NEXNQ0ZGT2 675 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 DUSP8Q13202 625 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 G3BP1Q13283 466 aaKnown RBP eCLIP4.39□□□□□ -1.714e-6■□□□□ 9.2
CDC27-211ENST00000570740 MOGSQ13724 837 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 PCOLCEQ15113 449 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 PRKD1Q15139 912 aaPredicted RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 NFE2L2Q16236 605 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 CCDC184Q52MB2 194 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 FNDC3BQ53EP0 1204 aaKnown RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 CCDC178Q5BJE1 867 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 SPDYAQ5MJ70 313 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 CATSPEREQ5SY80 951 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 AGBL4Q5VU57 503 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 ZKSCAN2Q63HK3 967 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 NAIF1Q69YI7 327 aaPredicted RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 GRAMD4Q6IC98 578 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 CC2D1AQ6P1N0 951 aaPredicted RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 CRIP3Q6Q6R5 217 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 USP30Q70CQ3 517 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 CCDC170Q8IYT3 715 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 GBP7Q8N8V2 638 aaPredicted RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 FAM76AQ8TAV0 307 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 ZNF483Q8TF39 744 aaPredicted RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 LZICQ8WZA0 190 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 CFHR4Q92496 578 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 EDAQ92838 391 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 GPATCH3Q96I76 525 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 FAXDC2Q96IV6 333 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 CLUHP3Q96NS8 147 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms