RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 CCDC38Q502W7 563 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 SGO2Q562F6 1265 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 INTS11Q5TA45 600 aaKnown RBP3.74□□□□□ -1.81
CNOT1-221ENST00000569924 PGBD2Q6P3X8 592 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 CCDC62Q6P9F0 684 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 RNF111Q6ZNA4 994 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 TSPYL5Q86VY4 417 aaPredicted RBP3.74□□□□□ -1.81
CNOT1-221ENST00000569924 PHYKPLQ8IUZ5 450 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 DRC7Q8IY82 874 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 MFSD4AQ8N468 514 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 UHMK1Q8TAS1 419 aaKnown RBP3.74□□□□□ -1.81
CNOT1-221ENST00000569924 PIP4K2CQ8TBX8 421 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 BRI3BPQ8WY22 251 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 DPF2Q92785 391 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 TBC1D20Q96BZ9 403 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 TMEM41AQ96HV5 264 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 THUMPD2Q9BTF0 503 aaKnown RBP3.74□□□□□ -1.81
CNOT1-221ENST00000569924 CDADC1Q9BWV3 514 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 FOXP3Q9BZS1 431 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 LRRC27Q9C0I9 530 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 MCOLN1Q9GZU1 580 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 IFT122Q9HBG6 1241 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 DUOX1Q9NRD9 1551 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 PDP2Q9P2J9 529 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 CNOT7Q9UIV1 285 aaKnown RBP3.74□□□□□ -1.81
CNOT1-221ENST00000569924 TSPYL4Q9UJ04 414 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 GJD2Q9UKL4 321 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 LIMCH1Q9UPQ0 1083 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 STXBP5LQ9Y2K9 1186 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 SLC4A7Q9Y6M7 1214 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 CASP8AP2Q9UKL3 1982 aa3.74□□□□□ -1.81
CNOT1-221ENST00000569924 ZNF609O15014 1411 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 CCDC154A6NI56 674 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 YDJCA8MPS7 323 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 PRSS47A8MTI9 375 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 FAM155AB1AL88 458 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 ELL2O00472 640 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 CHL1O00533 1208 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 ADAMTS3O15072 1205 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 HTRA2O43464 458 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 NCK2O43639 380 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 SNX2O60749 519 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RAD17O75943 681 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 FGF18O76093 207 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 CNOT4O95628 575 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 LPLP06858 475 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 HOXB7P09629 217 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 FAM87AP0C7U9 286 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 VSIG8P0DPA2 414 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 ELNP15502 786 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 HOXB4P17483 251 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 EIF2S2P20042 333 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 FPR2P25090 351 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RPS12P25398 132 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 GJA4P35212 333 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 TECP42680 631 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 STT3AP46977 705 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RXRGP48443 463 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 LGALS4P56470 323 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 HUNKP57058 714 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RIPK4P57078 832 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 POU5F1Q01860 360 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 ZNF543Q08ER8 600 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 TRIM28Q13263 835 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 BLMHQ13867 455 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 SF3B3Q15393 1217 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 PAN2Q504Q3 1202 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 CATSPEREQ5SY80 951 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RGMBQ6NW40 437 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 CFAP161Q6P656 301 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 APOA5Q6Q788 366 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 CYP26C1Q6V0L0 522 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 Q6ZS46 218 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 PDZD4Q76G19 769 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RSRC2Q7L4I2 434 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 COPS6Q7L5N1 327 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 SUGP1Q8IWZ8 645 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 NPAS3Q8IXF0 933 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 C7orf31Q8N865 590 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 NAT16Q8N8M0 369 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 KLHDC4Q8TBB5 520 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RIN2Q8WYP3 895 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 FAM46AQ96IP4 442 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 ZC3H10Q96K80 434 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 HEXIM2Q96MH2 286 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 PTPN18Q99952 460 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 C22orf23Q9BZE7 217 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 AKTIPQ9H8T0 292 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 GBA2Q9HCG7 927 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 KMT5AQ9NQR1 393 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RRN3Q9NYV6 651 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 NXF1Q9UBU9 619 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 DPP7Q9UHL4 492 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 POLG2Q9UHN1 485 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 TRMT112Q9UI30 125 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 TMPRSS11EQ9UL52 423 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 TPCN1Q9ULQ1 816 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 CORO2BQ9UQ03 480 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms