RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 C5orf42Q9H799 3197 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 SF3B1O75533 1304 aaKnown RBP eCLIP15.8■□□□□ 0.12
COMMD4-225ENST00000569245 SMIM28A0A1B0GU29 152 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 HNRNPDLO14979 420 aaKnown RBP15.8■□□□□ 0.12
COMMD4-225ENST00000569245 LETM1O95202 739 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-225ENST00000569245 EPCAMP16422 314 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 PROZP22891 400 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 SYCE2Q6PIF2 218 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 RBM43Q6ZSC3 357 aaKnown RBP15.8■□□□□ 0.12
COMMD4-225ENST00000569245 CEP57L1Q8IYX8 460 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 CCDC34Q96HJ3 373 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 DZANK1Q9NVP4 752 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 NCOR1O75376 2440 aa15.8■□□□□ 0.12
COMMD4-225ENST00000569245 LILRB3O75022 631 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 KIF4AO95239 1232 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 ADH1AP07327 375 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 NMT1P30419 496 aaKnown RBP15.79■□□□□ 0.12
COMMD4-225ENST00000569245 ABCD1P33897 745 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 DSG1Q02413 1049 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 SEZ6Q53EL9 994 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 RARS2Q5T160 578 aaKnown RBP15.79■□□□□ 0.12
COMMD4-225ENST00000569245 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 KIAA0319Q5VV43 1072 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 CEP57Q86XR8 500 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 C12orf76Q8N812 135 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-225ENST00000569245 SLC22A17Q8WUG5 538 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 RIN2Q8WYP3 895 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-225ENST00000569245 DDX12PQ92771 950 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 RPGRIP1Q96KN7 1286 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 PPP1R10Q96QC0 940 aaKnown RBP15.79■□□□□ 0.12
COMMD4-225ENST00000569245 S1PR5Q9H228 398 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 TNMDQ9H2S6 317 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 SLC38A7Q9NVC3 462 aa15.79■□□□□ 0.12
COMMD4-225ENST00000569245 HOOK1Q9UJC3 728 aaKnown RBP15.79■□□□□ 0.12
COMMD4-225ENST00000569245 MYMKA6NI61 221 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 ABLIM1O14639 778 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 TEX28O15482 410 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 B3GAT3O94766 335 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 EFEMP2O95967 443 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 IDEP14735 1019 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 CLCN4P51793 760 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 CLCNKBP51801 687 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 ITIH3Q06033 890 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 MCL1Q07820 350 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 CBX2Q14781 532 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-225ENST00000569245 NAB2Q15742 525 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 CAMK4Q16566 473 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 ZSCAN23Q3MJ62 389 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 ELMSAN1Q6PJG2 1045 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 DCLRE1AQ6PJP8 1040 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 ALKAL1Q6UXT8 129 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 RNF168Q8IYW5 571 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-225ENST00000569245 PAGE5Q96GU1 130 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 SNX27Q96L92 541 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 FBXL18Q96ME1 805 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 UROC1Q96N76 676 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 PHF7Q9BWX1 381 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-225ENST00000569245 ADAM7Q9H2U9 754 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 MRPL44Q9H9J2 332 aaKnown RBP15.78■□□□□ 0.12
COMMD4-225ENST00000569245 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.78■□□□□ 0.12
COMMD4-225ENST00000569245 CHST7Q9NS84 486 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 KBTBD4Q9NVX7 518 aa15.78■□□□□ 0.12
COMMD4-225ENST00000569245 C19orf67A6NJJ6 358 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 MYL1P05976 194 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 MYBP10242 640 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 GAP43P17677 238 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 CREMQ03060 361 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 ELAVL2Q12926 359 aaKnown RBP15.77■□□□□ 0.12
COMMD4-225ENST00000569245 ZC2HC1CQ53FD0 456 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-225ENST00000569245 TMC5Q6UXY8 1006 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 SFR1Q86XK3 245 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 PALB2Q86YC2 1186 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 GLYCTKQ8IVS8 523 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 SUSD6Q92537 303 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 KHSRPQ92945 711 aaKnown RBP eCLIP15.77■□□□□ 0.12
COMMD4-225ENST00000569245 DDX27Q96GQ7 796 aaKnown RBP15.77■□□□□ 0.12
COMMD4-225ENST00000569245 RIPOR3Q96MK2 946 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 TTPALQ9BTX7 342 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 MSTO1Q9BUK6 570 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 EPHX3Q9H6B9 360 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 GOLGA2P5Q9HBQ8 144 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 RXFP1Q9HBX9 757 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 TBC1D7Q9P0N9 293 aa15.77■□□□□ 0.12
COMMD4-225ENST00000569245 TRAPPC3O43617 180 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 GLUD1P00367 558 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 CLTAP09496 248 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 WEE2P0C1S8 567 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 SPATA31D3P0C874 917 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 ALADP13716 330 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 KCNE1P15382 129 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 RPL17P18621 184 aaKnown RBP15.76■□□□□ 0.11
COMMD4-225ENST00000569245 GTF2BQ00403 316 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 POSTNQ15063 836 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 KYAT1Q16773 422 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 UPP1Q16831 310 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 SLC10A6Q3KNW5 377 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 XKR4Q5GH76 650 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 HERC4Q5GLZ8 1057 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-225ENST00000569245 RTP2Q5QGT7 225 aa15.76■□□□□ 0.11
COMMD4-225ENST00000569245 ATAT1Q5SQI0 421 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms