RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 CAMK1Q14012 370 aa13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 CCDC186Q7Z3E2 898 aa13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 COLGALT2Q8IYK4 626 aa13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 IGSF21Q96ID5 467 aa13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 HAPLN2Q9GZV7 340 aa13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 NSUN3Q9H649 340 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 TLR9Q9NR96 1032 aa13.66□□□□□ -0.22
NSMCE1-214ENST00000569236 ATG2AQ2TAZ0 1938 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 CITO14578 2027 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 NRP1O14786 923 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 CDK11BP21127 795 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 ERCC5P28715 1186 aaPredicted RBP13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 OR1G1P47890 313 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 SKIV2LQ15477 1246 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 KYAT1Q16773 422 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 SEZ6Q53EL9 994 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 FAM26FQ5R3K3 315 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 SLC39A4Q6P5W5 647 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 MICAL1Q8TDZ2 1067 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 MSTO1Q9BUK6 570 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 FGFBP2Q9BYJ0 223 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 TMEM206Q9H813 350 aa13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 PRG3Q9Y2Y8 225 aaPredicted RBP13.65□□□□□ -0.22
NSMCE1-214ENST00000569236 MYO7AQ13402 2215 aa13.64□□□□□ -0.23
NSMCE1-214ENST00000569236 A0A0B4J269 797 aa13.64□□□□□ -0.23
NSMCE1-214ENST00000569236 ANKRD63C9JTQ0 380 aa13.64□□□□□ -0.23
NSMCE1-214ENST00000569236 PRPF6O94906 941 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-214ENST00000569236 TUSC3Q13454 348 aa13.64□□□□□ -0.23
NSMCE1-214ENST00000569236 GLRA4Q5JXX5 417 aa13.64□□□□□ -0.23
NSMCE1-214ENST00000569236 ENOX1Q8TC92 643 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-214ENST00000569236 CXCL16Q9H2A7 254 aa13.64□□□□□ -0.23
NSMCE1-214ENST00000569236 SMIM28A0A1B0GU29 152 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 TISP43B9A030 160 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 OGTO15294 1046 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 CLTAP09496 248 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 IRS1P35568 1242 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 EHHADHQ08426 723 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 ALKAL1Q6UXT8 129 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 GLIS3Q8NEA6 775 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 POMGNT1Q8WZA1 660 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 PPP2R3CQ969Q6 453 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 SNX27Q96L92 541 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 TCF25Q9BQ70 676 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 COLEC11Q9BWP8 271 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 XPO4Q9C0E2 1151 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 IKZF4Q9H2S9 585 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 ENTPD7Q9NQZ7 604 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 STYXL1Q9Y6J8 313 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 CXCL8P10145 99 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 ATP1A3P13637 1013 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 TNFSF9P41273 254 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 ERVFC1P60507 584 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 FANCCQ00597 558 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 BMS1Q14692 1282 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 NAB2Q15742 525 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 SLC10A6Q3KNW5 377 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 XKR4Q5GH76 650 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 TCEAL5Q5H9L2 206 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 PDE12Q6L8Q7 609 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 TMC7Q7Z402 723 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 DDX53Q86TM3 631 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 PPP1R10Q96QC0 940 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 SLC39A2Q9NP94 309 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 NGRNQ9NPE2 291 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 SPTLC3Q9NUV7 552 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 EXOC1Q9NV70 894 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 SLC38A7Q9NVC3 462 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 MARCH5Q9NX47 278 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 IFNKQ9P0W0 207 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 IMPACTQ9P2X3 320 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 STK39Q9UEW8 545 aa13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 AGO2Q9UKV8 859 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-214ENST00000569236 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 CASTOR2A6NHX0 329 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 KLRC4O43908 158 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 FAM189A1O60320 539 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 RPN1P04843 607 aaKnown RBP13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 ZNF18P17022 549 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 PPP2R3AQ06190 1150 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 KMT5BQ4FZB7 885 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 PLPP4Q5VZY2 271 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 EPM2AIP1Q7L775 607 aaPredicted RBP13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 VPS52Q8N1B4 723 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 CCDC47Q96A33 483 aaKnown RBP13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 FANCLQ9NW38 375 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms