RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ELAVL2Q12926 359 aaKnown RBP8.56□□□□□ -1.04
CDH3-209ENST00000569080 STRN3Q13033 797 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 PSMD5Q16401 504 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 SLC10A6Q3KNW5 377 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 SEZ6Q53EL9 994 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 ATAT1Q5SQI0 421 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 ZBTB41Q5SVQ8 909 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 FAM171A1Q5VUB5 890 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 RSPO2Q6UXX9 243 aaPredicted RBP8.56□□□□□ -1.04
CDH3-209ENST00000569080 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.56□□□□□ -1.04
CDH3-209ENST00000569080 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 HAUS6Q7Z4H7 955 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 APBB1IPQ7Z5R6 666 aaPredicted RBP8.56□□□□□ -1.04
CDH3-209ENST00000569080 BMP8AQ7Z5Y6 402 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 ZBTB33Q86T24 672 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 MAP4K3Q8IVH8 894 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 ZDHHC14Q8IZN3 488 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 TMEM130Q8N3G9 435 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 TMEM87AQ8NBN3 555 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 HDAC7Q8WUI4 952 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 C18orf25Q96B23 403 aaPredicted RBP8.56□□□□□ -1.04
CDH3-209ENST00000569080 DDX27Q96GQ7 796 aaKnown RBP8.56□□□□□ -1.04
CDH3-209ENST00000569080 UROC1Q96N76 676 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 CLIC6Q96NY7 704 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 SMOC2Q9H3U7 446 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 ST6GALNAC4Q9H4F1 302 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 PLEKHA4Q9H4M7 779 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 PARVGQ9HBI0 331 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 TOPORSQ9NS56 1045 aaPredicted RBP8.56□□□□□ -1.04
CDH3-209ENST00000569080 FOXD4L1Q9NU39 408 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 ZDHHC7Q9NXF8 308 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 MTRRQ9UBK8 725 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 STK17AQ9UEE5 414 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 TUBGCP4Q9UGJ1 667 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 TBX20Q9UMR3 447 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 NR2E1Q9Y466 385 aa8.56□□□□□ -1.04
CDH3-209ENST00000569080 ARIH1Q9Y4X5 557 aaPredicted RBP8.56□□□□□ -1.04
CDH3-209ENST00000569080 CLUHO75153 1309 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 MYO10Q9HD67 2058 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 TTC26A0AVF1 554 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 FRMD3A2A2Y4 597 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 TMEM221A6NGB7 291 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 TISP43B9A030 160 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 H0YCG3 227 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 I3L4J1 428 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 K7ENM7 598 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 M0R296 226 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 PODXLO00592 558 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 TBC1D4O60343 1298 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 B3GAT3O94766 335 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 FAM13AO94988 1023 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 ASGR2P07307 311 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 ADRB2P07550 413 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 SPATA31D3P0C874 917 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 CXCL8P10145 99 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 MYBP10242 640 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 SCP2P22307 547 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 TNFSF9P41273 254 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 BRCC3P46736 316 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 YARSP54577 528 aaKnown RBP8.55□□□□□ -1.04
CDH3-209ENST00000569080 GTF2BQ00403 316 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 SIGLEC14Q08ET2 396 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 DHX8Q14562 1220 aaKnown RBP8.55□□□□□ -1.04
CDH3-209ENST00000569080 SLC39A14Q15043 492 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 DCLRE1AQ6PJP8 1040 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 CYP26C1Q6V0L0 522 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 SPATA31D4Q6ZUB0 917 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 CCDC149Q6ZUS6 474 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 PALB2Q86YC2 1186 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 GLYCTKQ8IVS8 523 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 TDRD5Q8NAT2 981 aaKnown RBP8.55□□□□□ -1.04
CDH3-209ENST00000569080 LINC00301Q8NCQ3 95 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 KREMEN2Q8NCW0 462 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 DNAJC19Q96DA6 116 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 ACAP3Q96P50 834 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 STRA6Q9BX79 667 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 ZSCAN16Q9H4T2 348 aaPredicted RBP8.55□□□□□ -1.04
CDH3-209ENST00000569080 WDR6Q9NNW5 1121 aaKnown RBP8.55□□□□□ -1.04
CDH3-209ENST00000569080 SLC38A7Q9NVC3 462 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 KCNG1Q9UIX4 513 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 HCN4Q9Y3Q4 1203 aa8.55□□□□□ -1.04
CDH3-209ENST00000569080 A0A0B4J269 797 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 CCDC195A0A1B0GUA6 201 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 MYMKA6NI61 221 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 HNRNPDLO14979 420 aaKnown RBP8.54□□□□□ -1.04
CDH3-209ENST00000569080 CLDN3O15551 220 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 TRAK2O60296 914 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 TBCAO75347 108 aaKnown RBP8.54□□□□□ -1.04
CDH3-209ENST00000569080 ZMYND10O75800 440 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 POU2F2P09086 479 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 NMT1P30419 496 aaKnown RBP8.54□□□□□ -1.04
CDH3-209ENST00000569080 LRPAP1P30533 357 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 DDIT3P35638 169 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 PLA2G5P39877 138 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 AARSP49588 968 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDH3-209ENST00000569080 CEBPZQ03701 1054 aaKnown RBP8.54□□□□□ -1.04
CDH3-209ENST00000569080 MTMR3Q13615 1198 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 PKP1Q13835 747 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 RAB33AQ14088 237 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms