RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	CYP3A5	P20815	502 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	SCNN1G	P51170	649 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	VAMP7	P51809	220 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	MCCD1	P59942	119 aa	Predicted RBP	13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	CLDN10	P78369	228 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	BTG3	Q14201	252 aa	Predicted RBP	13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	CDKAL1	Q5VV42	579 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	GSTCD	Q8NEC7	633 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	PARD3B	Q8TEW8	1205 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	CACTIN	Q8WUQ7	758 aa	Known RBP	13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	CCDC127	Q96BQ5	260 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	ZNF689	Q96CS4	500 aa	Predicted RBP	13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	FAM212A	Q96EL1	285 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	EEF2KMT	Q96G04	330 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	LRCH3	Q96II8	777 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	CNOT6L	Q96LI5	555 aa	Known RBP	13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	CASD1	Q96PB1	797 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	PPP1R10	Q96QC0	940 aa	Known RBP	13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	CBX8	Q9HC52	389 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	TBC1D13	Q9NVG8	400 aa		13.01	□□□□□ -0.33
FANCA-231	ENST00000568626	GOLGA6L19	H0YKK7	550 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	RBAK-RBAKDN	I3L0D1	243 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	MEFV	O15553	781 aa	Predicted RBP	13	□□□□□ -0.33
FANCA-231	ENST00000568626	TLL1	O43897	1013 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	NFIC	P08651	508 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	TMEM191B	P0C7N4	346 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	DLAT	P10515	647 aa	Known RBP	13	□□□□□ -0.33
FANCA-231	ENST00000568626	TNNI1	P19237	187 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	GTF2H1	P32780	548 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	RNASEL	Q05823	741 aa	Known RBP	13	□□□□□ -0.33
FANCA-231	ENST00000568626	TUSC3	Q13454	348 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	NCAPH	Q15003	741 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	IQCB1	Q15051	598 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	RAB30	Q15771	203 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	GLRA4	Q5JXX5	417 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	FAM117B	Q6P1L5	589 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	TRIM59	Q8IWR1	403 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	DHX40	Q8IX18	779 aa	Known RBP	13	□□□□□ -0.33
FANCA-231	ENST00000568626	BEST2	Q8NFU1	509 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	SP7	Q8TDD2	431 aa	Predicted RBP	13	□□□□□ -0.33
FANCA-231	ENST00000568626	KIF12	Q96FN5	646 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	BORCS6	Q96GS4	357 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	ANKRD36BP1	Q96IX9	119 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	UROC1	Q96N76	676 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	FAM193B	Q96PV7	902 aa	Predicted RBP	13	□□□□□ -0.33
FANCA-231	ENST00000568626	PDE11A	Q9HCR9	933 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	INTS13	Q9NVM9	706 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	PCDHA11	Q9Y5I1	949 aa		13	□□□□□ -0.33
FANCA-231	ENST00000568626	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	KCNJ18	B7U540	433 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	N4BP1	O75113	896 aa	Known RBP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	POMC	P01189	267 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	TNNC2	P02585	160 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	TPM2	P07951	284 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	MTIF2	P46199	727 aa	Known RBP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	GATM	P50440	423 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	TFAM	Q00059	246 aa	Known RBP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	DSC1	Q08554	894 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	KCNJ12	Q14500	433 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	ZBTB6	Q15916	424 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	DUOXA2	Q1HG44	320 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	DCAF17	Q5H9S7	520 aa	Predicted RBP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	JADE1	Q6IE81	842 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	IRF2BP1	Q8IU81	584 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	EFCAB13	Q8IY85	973 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	FIBCD1	Q8N539	461 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	SLC35C1	Q96A29	364 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	ZMAT2	Q96NC0	199 aa	Known RBP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	TMEM175	Q9BSA9	504 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	AAAS	Q9NRG9	546 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	FANCL	Q9NW38	375 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	RWDD3	Q9Y3V2	267 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	TRIP11	Q15643	1979 aa		12.99	□□□□□ -0.33
FANCA-231	ENST00000568626	COL6A3	P12111	3177 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	ZNF18	P17022	549 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	LAG3	P18627	525 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	PAX3	P23760	479 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	LRPAP1	P30533	357 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	RPL9	P32969	192 aa	Known RBP	12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	MXI1	P50539	228 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	AFF1	P51825	1210 aa	Known RBP	12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	WNT7B	P56706	349 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	NAB2	Q15742	525 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	MAN2A1	Q16706	1144 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	PAN2	Q504Q3	1202 aa	Known RBP	12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	TCP11X2	Q5H9J9	407 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	TCERG1L	Q5VWI1	586 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	PLEKHO2	Q8TD55	490 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	DDX27	Q96GQ7	796 aa	Known RBP	12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	MTMR12	Q9C0I1	747 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	SAMSN1	Q9NSI8	373 aa	Known RBP	12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	ITGA11	Q9UKX5	1188 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	PLAGL2	Q9UPG8	496 aa		12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.98	□□□□□ -0.33
FANCA-231	ENST00000568626	GBF1	Q92538	1859 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626		A0A0C4DFX4	3053 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms