RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 K7ERI5 159 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 ADAM12O43184 909 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 B3GAT3O94766 335 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 LIG1P18858 919 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 OR1D2P34982 312 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 CCT6AP40227 531 aaKnown RBP16.55■□□□□ 0.24
COMMD4-223ENST00000568301 PDIA5Q14554 519 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 TTC38Q5R3I4 469 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 AXDND1Q5T1B0 1012 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-223ENST00000568301 NT5DC1Q5TFE4 455 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 ATF7IP2Q5U623 682 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 MTSS1LQ765P7 747 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 C4orf32Q8N8J7 132 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 SUMF1Q8NBK3 374 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 UROC1Q96N76 676 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 BHMT2Q9H2M3 363 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 DLL3Q9NYJ7 618 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 MTRRQ9UBK8 725 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 TNFSF13BQ9Y275 285 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 MTF2Q9Y483 593 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-223ENST00000568301 BACE2Q9Y5Z0 518 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 STK24Q9Y6E0 443 aa16.55■□□□□ 0.24
COMMD4-223ENST00000568301 CCL16O15467 120 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 TRAPPC3O43617 180 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 ECM1Q16610 540 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 UPP1Q16831 310 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 SLC7A14Q8TBB6 771 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 KIFC3Q9BVG8 833 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 PPP4R2Q9NY27 417 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 LRWD1Q9UFC0 647 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 KCNH3Q9ULD8 1083 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 POLIQ9UNA4 740 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 KIAA1024Q9UPX6 916 aa16.54■□□□□ 0.24
COMMD4-223ENST00000568301 KANSL1LA0AUZ9 987 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
COMMD4-223ENST00000568301 CLCNKBP51801 687 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
COMMD4-223ENST00000568301 SLC44A4Q53GD3 710 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 XKR4Q5GH76 650 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 CD300LGQ6UXG3 332 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 ALKAL1Q6UXT8 129 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 ANKS3Q6ZW76 656 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 ITFG1Q8TB96 612 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 DDX27Q96GQ7 796 aaKnown RBP16.53■□□□□ 0.24
COMMD4-223ENST00000568301 DDX23Q9BUQ8 820 aaKnown RBP16.53■□□□□ 0.24
COMMD4-223ENST00000568301 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
COMMD4-223ENST00000568301 TOPORSQ9NS56 1045 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-223ENST00000568301 SPATA6Q9NWH7 488 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-223ENST00000568301 NOL7Q9UMY1 257 aaKnown RBP16.53■□□□□ 0.24
COMMD4-223ENST00000568301 PATJQ8NI35 1801 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 SMIM28A0A1B0GU29 152 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 CD72P21854 359 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 IGFBP6P24592 240 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-223ENST00000568301 GRM5P41594 1212 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
COMMD4-223ENST00000568301 PRKCQQ04759 706 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 UBXN2BQ14CS0 331 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 MLF2Q15773 248 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-223ENST00000568301 RSPO4Q2I0M5 234 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-223ENST00000568301 GLRA4Q5JXX5 417 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 RSPO2Q6UXX9 243 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-223ENST00000568301 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 ACO2Q99798 780 aaKnown RBP16.52■□□□□ 0.24
COMMD4-223ENST00000568301 BCO2Q9BYV7 579 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 RAB34Q9BZG1 259 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 TMEM134Q9H6X4 195 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 PTPRHQ9HD43 1115 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 DDX19AQ9NUU7 478 aaKnown RBP16.52■□□□□ 0.24
COMMD4-223ENST00000568301 SLC38A7Q9NVC3 462 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 DNMT3BQ9UBC3 853 aaKnown RBP16.52■□□□□ 0.24
COMMD4-223ENST00000568301 CDY1Q9Y6F8 540 aa16.52■□□□□ 0.24
COMMD4-223ENST00000568301 CITO14578 2027 aa16.52■□□□□ 0.23
COMMD4-223ENST00000568301 PHLPP2Q6ZVD8 1323 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 FAM170BA6NMN3 283 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 U2AF2P26368 475 aaKnown RBP eCLIP16.51■□□□□ 0.23
COMMD4-223ENST00000568301 PFKPQ01813 784 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 GNL2Q13823 731 aaKnown RBP16.51■□□□□ 0.23
COMMD4-223ENST00000568301 ZNF528Q3MIS6 628 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 PABPC1LQ4VXU2 614 aaKnown RBP16.51■□□□□ 0.23
COMMD4-223ENST00000568301 ERICH6BQ5W0A0 696 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 ZNF461Q8TAF7 563 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 ZSCAN31Q96LW9 406 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-223ENST00000568301 KXD1Q9BQD3 176 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 CCDC94Q9BW85 323 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-223ENST00000568301 OSBPL6Q9BZF3 934 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 C17orf75Q9HAS0 396 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 HCFC1R1Q9NWW0 138 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 DNM3Q9UQ16 869 aa16.51■□□□□ 0.23
COMMD4-223ENST00000568301 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
COMMD4-223ENST00000568301 EPG5Q9HCE0 2579 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 CCDC169A6NNP5 214 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 ABLIM3O94929 683 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 SEC24BO95487 1268 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 TKTP29401 623 aaKnown RBP16.5■□□□□ 0.23
COMMD4-223ENST00000568301 NPTX2P47972 431 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 PEX3P56589 373 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 CSTF1Q05048 431 aaKnown RBP16.5■□□□□ 0.23
COMMD4-223ENST00000568301 PTGDRQ13258 359 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms