RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 C1orf112Q9NSG2 853 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 NINJ2Q9NZG7 142 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 SRP68Q9UHB9 627 aaKnown RBP11.56□□□□□ -0.56
PALB2-206ENST00000568219 SERPINB13Q9UIV8 391 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 CACNA1FO60840 1977 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 C2orf71A6NGG8 1288 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 GDF11O95390 407 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 MYCLP12524 364 aaPredicted RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 SP100P23497 879 aaPredicted RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 ASPHQ12797 758 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 EPHA7Q15375 998 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 C3orf62Q6ZUJ4 267 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 PI4K2AQ9BTU6 479 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 AMNQ9BXJ7 453 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 IMPG2Q9BZV3 1241 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 ZWILCHQ9H900 591 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 CLIC5Q9NZA1 410 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 FAM208AQ9UK61 1670 aaKnown RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 RPTORQ8N122 1335 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 CLTCQ00610 1675 aaKnown RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 CES2O00748 559 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 DKC1O60832 514 aaKnown RBP eCLIP11.55□□□□□ -0.56
PALB2-206ENST00000568219 ZSCAN5DPP0CG00 497 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 DESP17661 470 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 GAP43P17677 238 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 PEX3P56589 373 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 ARHGEF3Q9NR81 526 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 FBXO6Q9NRD1 293 aaPredicted RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 CHCHD3Q9NX63 227 aaKnown RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 ACADSP16219 412 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 ADRA1DP25100 572 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 PSMC4P43686 418 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 ICA1Q05084 483 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 CYFIP1Q7L576 1253 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 SLC47A2Q86VL8 602 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 LRRC6Q86X45 466 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 ARID3BQ8IVW6 561 aaPredicted RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 NME8Q8N427 588 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 DAGLBQ8NCG7 672 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 TTC16Q8NEE8 873 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 CYP2W1Q8TAV3 490 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 OPTNQ96CV9 577 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 ACAP3Q96P50 834 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 FAM111AQ96PZ2 611 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 CALN1Q9BXU9 219 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 AJAP1Q9UKB5 411 aaPredicted RBP11.55□□□□□ -0.56
PALB2-206ENST00000568219 DIP2AQ14689 1571 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 TSPOAP1O95153 1857 aa11.55□□□□□ -0.56
PALB2-206ENST00000568219 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 COPEO14579 308 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 TPBGLP0DKB5 382 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 SCNN1BP51168 640 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 SLC34A1Q06495 639 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 RFWD3Q6PCD5 774 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 PDIK1LQ8N165 341 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 TUBB6Q9BUF5 446 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 MANSC1Q9H8J5 431 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 JMJD4Q9H9V9 463 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 PCDHB4Q9Y5E5 795 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 A0A1B0GVG6 124 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 CYTH1Q15438 398 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 SBK1Q52WX2 424 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 GPATCH4Q5T3I0 446 aaKnown RBP11.54□□□□□ -0.56
PALB2-206ENST00000568219 DSTYKQ6XUX3 929 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 GORASP1Q9BQQ3 440 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 F5H423 210 aaPredicted RBP11.54□□□□□ -0.56
PALB2-206ENST00000568219 SLC16A4O15374 487 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 MYL2P10916 166 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 TAC1P20366 129 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 ABL2P42684 1182 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 MCL1Q07820 350 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 XKR9Q5GH70 373 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 PCNX4Q63HM2 1172 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 ZDHHC24Q6UX98 284 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 MORC4Q8TE76 937 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 PPP1R36Q96LQ0 422 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 MTMR9Q96QG7 549 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 ZNF577Q9BSK1 485 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 OSBPL8Q9BZF1 889 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 GLT8D2Q9H1C3 349 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 MAGED2Q9UNF1 606 aaPredicted RBP11.54□□□□□ -0.56
PALB2-206ENST00000568219 COG5Q9UP83 839 aa11.54□□□□□ -0.56
PALB2-206ENST00000568219 A0A0A6YYK5 440 aaPredicted RBP11.53□□□□□ -0.56
PALB2-206ENST00000568219 TISP43B9A030 160 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 PGM3O95394 542 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 FOXN2P32314 431 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 RASA3Q14644 834 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 DOK7Q18PE1 504 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 NXNQ6DKJ4 435 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 IRGCQ6NXR0 463 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 LRRC43Q8N309 656 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
PALB2-206ENST00000568219 NYXQ9GZU5 481 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 C10orf88Q9H8K7 445 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 MYH13Q9UKX3 1938 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms