RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 PRSS23O95084 383 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 PARNO95453 639 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 VCAM1P19320 739 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 SLC6A2P23975 617 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 ZFP36P26651 326 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 APOBEC3AP31941 199 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 PTH1RQ03431 593 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 PGS1Q32NB8 556 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 FLYWCH1Q4VC44 716 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 KHDC1Q4VXA5 237 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 FAM102AQ5T9C2 384 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 NXNQ6DKJ4 435 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 EFCAB12Q6NXP0 572 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 ZNF529Q6P280 563 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 RNF207Q6ZRF8 634 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 UBE3BQ7Z3V4 1068 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 TTC7BQ86TV6 843 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 ZFPM1Q8IX07 1006 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 DRC7Q8IY82 874 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 TCEAL8Q8IYN2 117 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 SLC35G2Q8TBE7 412 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 TAAR9Q96RI9 348 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 VRK1Q99986 396 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 TEX101Q9BY14 249 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 CALCOCO1Q9P1Z2 691 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 CHST2Q9Y4C5 530 aa5.08□□□□□ -1.6
HERPUD1-212ENST00000567944 CCDC78A2IDD5 438 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 GOLGA6L6A8MZA4 724 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 AP1G1O43747 822 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 ALDH2P05091 517 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 C1SP09871 688 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 MALP21145 153 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 NR4A1P22736 598 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 MAP2K6P52564 334 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 CHN2P52757 468 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 RAP2BP61225 183 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 DGCR2P98153 550 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 NHLH2Q02577 135 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 SNAPC2Q13487 334 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 RAB39AQ14964 217 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 UBXN2BQ14CS0 331 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 ATXN7L2Q5T6C5 722 aaPredicted RBP5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 IFIT1BQ5T764 474 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 RSPH3Q86UC2 560 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 C1orf210Q8IVY1 113 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 ZFP28Q8NHY6 868 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 SH3RF3Q8TEJ3 882 aaPredicted RBP5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 DIS3LQ8TF46 1054 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 ZNF503Q96F45 646 aa5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 C11orf54Q9H0W9 315 aaPredicted RBP5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 METTL14Q9HCE5 456 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-212ENST00000567944 PRSS29PA6NIE9 313 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 F2RL2O00254 374 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 ZNF185O15231 689 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 GRM6O15303 877 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 TEX33O43247 280 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 CT47B1P0C2W7 299 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 HK3P52790 923 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 FAM189BP81408 668 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 CRHR2Q13324 411 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 GTF2H3Q13889 308 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 CNGB1Q14028 1251 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 RABL3Q5HYI8 236 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 PPP4R3AQ6IN85 833 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 CXorf57Q6NSI4 855 aaKnown RBP5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 MAGEB6Q8N7X4 407 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 IL17RDQ8NFM7 739 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 CACTINQ8WUQ7 758 aaKnown RBP5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 RUNDC1Q96C34 613 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 LRGUKQ96M69 825 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 LRFN3Q9BTN0 628 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 ZNF768Q9H5H4 540 aaKnown RBP5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 AURKAIP1Q9NWT8 199 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 CLCA2Q9UQC9 943 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 NISCHQ9Y2I1 1504 aa5.06□□□□□ -1.6
HERPUD1-212ENST00000567944 OFD1O75665 1012 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 POMCP01189 267 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 AMHP03971 560 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 NOGQ13253 232 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 NRN1LQ496H8 165 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 FNDC7Q5VTL7 733 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 AGAP9Q5VTM2 703 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 IGFL4Q6B9Z1 124 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 MED25Q71SY5 747 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 FMNL3Q8IVF7 1028 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 GRAMD1CQ8IYS0 662 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 PLBD2Q8NHP8 589 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 PPP1R35Q8TAP8 253 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 RGMAQ96B86 450 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 MAP3K14Q99558 947 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 ACO2Q99798 780 aaKnown RBP5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 GSTO2Q9H4Y5 243 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 VSX1Q9NZR4 365 aaPredicted RBP5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 POGKQ9P215 609 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 TCEAL9Q9UHQ7 104 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 SORCS3Q9UPU3 1222 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 PCDHA3Q9Y5H8 950 aa5.05□□□□□ -1.6
HERPUD1-212ENST00000567944 KIAA0391O15091 583 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 TRIM24O15164 1050 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 MATN3O15232 486 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms