RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 PNOCQ13519 176 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 SMC1AQ14683 1233 aaKnown RBP11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 ARMCX5Q6P1M9 558 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 FUT10Q6P4F1 479 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 CRELD2Q6UXH1 353 aaPredicted RBP11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 RBM23Q86U06 439 aaKnown RBP11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 RNF168Q8IYW5 571 aaPredicted RBP11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 ZSWIM2Q8NEG5 633 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 HASPINQ8TF76 798 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 CCDC47Q96A33 483 aaKnown RBP11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 C18orf25Q96B23 403 aaPredicted RBP11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 SAAL1Q96ER3 474 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 TIGD1Q96MW7 591 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 UROC1Q96N76 676 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 HERC2P3Q9BVR0 1158 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 PCIF1Q9H4Z3 704 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 TUBGCP4Q9UGJ1 667 aa11.7□□□□□ -0.54
NSMCE1-213ENST00000567710 CITO14578 2027 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 SF3B1O75533 1304 aaKnown RBP eCLIP11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 C2orf71A6NGG8 1288 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 TMEM189-UBE2V1I3L0A0 370 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 TADA2AO75478 443 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 LDHAP00338 332 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 CA8P35219 290 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 NRIP1P48552 1158 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 UBE2HP62256 183 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 POU5F1Q01860 360 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 BMS1Q14692 1282 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 KCNB1Q14721 858 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 COL19A1Q14993 1142 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 UPP1Q16831 310 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 KNOP1Q1ED39 458 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 CLEC17AQ6ZS10 378 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 TAS1R1Q7RTX1 841 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 CD302Q8IX05 232 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 TMEM130Q8N3G9 435 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 MRPL43Q8N983 215 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 AUTS2Q8WXX7 1259 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 FAM213AQ9BRX8 229 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 GPR62Q9BZJ7 368 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 IGFLR1Q9H665 355 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 AGPAT3Q9NRZ7 376 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 THEGQ9P2T0 379 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 IRAK3Q9Y616 596 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 BRWD1Q9NSI6 2320 aa11.69□□□□□ -0.54
NSMCE1-213ENST00000567710 TRIP11Q15643 1979 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 A0A0C4DFX4 3053 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 GOLGA8IPA6NC78 632 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 GOLGA8JA6NMD2 632 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 PODXLO00592 558 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 PER2O15055 1255 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 KIAA0391O15091 583 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 NCK2O43639 380 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 EXTL3O43909 919 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 KINO60870 393 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 PRPF40AO75400 957 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 B3GAT3O94766 335 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 CXCL14O95715 111 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 URODP06132 367 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 NFICP08651 508 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 CYP3A5P20815 502 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 IGFBP6P24592 240 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 WNT7BP56706 349 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 SNRPFP62306 86 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 ZBTB6Q15916 424 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 DUSP6Q16828 381 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 CTC1Q2NKJ3 1217 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 JADE1Q6IE81 842 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 DCLRE1AQ6PJP8 1040 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 CD300LGQ6UXG3 332 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 HS2ST1Q7LGA3 356 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 BRSK2Q8IWQ3 736 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 GPD1LQ8N335 351 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 C3orf58Q8NDZ4 430 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 NOC3LQ8WTT2 800 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 ERCC4Q92889 916 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 HLA-CQ95604 372 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 PABPC5Q96DU9 382 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 TSPAN18Q96SJ8 248 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 CDCA3Q99618 268 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 ASB7Q9H672 318 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 TLE6Q9H808 572 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 UBE2ZQ9H832 354 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 CLDND1Q9NY35 253 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 HSPBP1Q9NZL4 362 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 UBQLN1Q9UMX0 589 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 COG5Q9UP83 839 aa11.68□□□□□ -0.54
NSMCE1-213ENST00000567710 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.67□□□□□ -0.54
NSMCE1-213ENST00000567710 C2CD2LO14523 706 aa11.67□□□□□ -0.54
NSMCE1-213ENST00000567710 CLIC2O15247 247 aa11.67□□□□□ -0.54
NSMCE1-213ENST00000567710 LINC01565O15544 149 aa11.67□□□□□ -0.54
NSMCE1-213ENST00000567710 XPOTO43592 962 aaKnown RBP11.67□□□□□ -0.54
NSMCE1-213ENST00000567710 LILRB3O75022 631 aa11.67□□□□□ -0.54
NSMCE1-213ENST00000567710 IL18RAPO95256 599 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms