RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ALKAL1Q6UXT8 129 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 SV2BQ7L1I2 683 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 PLIN2Q99541 437 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 PRRX2Q99811 253 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 POMKQ9H5K3 350 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 MUTYHQ9UIF7 546 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 FBXO2Q9UK22 296 aaPredicted RBP18.28■□□□□ 0.52
USB1-211ENST00000565662 EXOC7Q9UPT5 735 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 SORCS3Q9UPU3 1222 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 PPP6R2O75170 966 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 YEATS4O95619 227 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 CYP3A5P20815 502 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 PPP2R3AQ06190 1150 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 SIGLEC14Q08ET2 396 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 STK38Q15208 465 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 UVSSAQ2YD98 709 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 ARSHQ5FYA8 562 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 MAP4K3Q8IVH8 894 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 NXPE3Q969Y0 559 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 PYM1Q9BRP8 204 aaKnown RBP18.27■□□□□ 0.52
USB1-211ENST00000565662 TBX20Q9UMR3 447 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 BACE2Q9Y5Z0 518 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 CLIC4Q9Y696 253 aa18.27■□□□□ 0.52
USB1-211ENST00000565662 ZFP37Q9Y6Q3 630 aaPredicted RBP18.27■□□□□ 0.52
USB1-211ENST00000565662 PLXNA3P51805 1871 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 TRIP11Q15643 1979 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 SFI1A8K8P3 1242 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 H7C4K7 107 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 ABLIM1O14639 778 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 OGTO15294 1046 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 FGFR3P22607 806 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 STAT6P42226 847 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 ZXDAP98168 799 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 GTF2BQ00403 316 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 MCM6Q14566 821 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 POSTNQ15063 836 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 TMC5Q6UXY8 1006 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 STXBP4Q6ZWJ1 553 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 KHSRPQ92945 711 aaKnown RBP eCLIP18.26■□□□□ 0.51
USB1-211ENST00000565662 MAGEF1Q9HAY2 307 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 MAFFQ9ULX9 164 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 UBQLN1Q9UMX0 589 aaKnown RBP18.26■□□□□ 0.51
USB1-211ENST00000565662 NUB1Q9Y5A7 615 aa18.26■□□□□ 0.51
USB1-211ENST00000565662 PODXLO00592 558 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 TGM5O43548 720 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 XYLBO75191 536 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 MARCKSP29966 332 aaPredicted RBP18.25■□□□□ 0.51
USB1-211ENST00000565662 CLCNKBP51801 687 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 AMPD3Q01432 767 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 GLRA4Q5JXX5 417 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 RTP2Q5QGT7 225 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 TRIM67Q6ZTA4 783 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 CEP57Q86XR8 500 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 KREMEN2Q8NCW0 462 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 APPL2Q8NEU8 664 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 KCNG4Q8TDN1 519 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 APOL5Q9BWW9 433 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 ZHX3Q9H4I2 956 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 PIDD1Q9HB75 910 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 POLD4Q9HCU8 107 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 WDR6Q9NNW5 1121 aaKnown RBP18.25■□□□□ 0.51
USB1-211ENST00000565662 C11orf16Q9NQ32 467 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 OLFML3Q9NRN5 406 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.25■□□□□ 0.51
USB1-211ENST00000565662 IGSF9Q9P2J2 1179 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 MTRRQ9UBK8 725 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 FBXW11Q9UKB1 542 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 DERAQ9Y315 318 aa18.25■□□□□ 0.51
USB1-211ENST00000565662 CLUHO75153 1309 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 CCDC195A0A1B0GUA6 201 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 HARSP12081 509 aaKnown RBP18.24■□□□□ 0.51
USB1-211ENST00000565662 OSTNP61366 133 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 DHX8Q14562 1220 aaKnown RBP18.24■□□□□ 0.51
USB1-211ENST00000565662 LILRA6Q6PI73 481 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 TAS1R1Q7RTX1 841 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 SUGP1Q8IWZ8 645 aaKnown RBP18.24■□□□□ 0.51
USB1-211ENST00000565662 CEP120Q8N960 986 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 LNX1Q8TBB1 728 aaPredicted RBP18.24■□□□□ 0.51
USB1-211ENST00000565662 SMG7Q92540 1137 aaKnown RBP18.24■□□□□ 0.51
USB1-211ENST00000565662 USP28Q96RU2 1077 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 PAAF1Q9BRP4 392 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 PRKD2Q9BZL6 878 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 TNMDQ9H2S6 317 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 RPF1Q9H9Y2 349 aaKnown RBP18.24■□□□□ 0.51
USB1-211ENST00000565662 CFAP45Q9UL16 551 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 PCDHB13Q9Y5F0 798 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 C2orf16Q68DN1 1984 aa18.24■□□□□ 0.51
USB1-211ENST00000565662 C2CD4DB7Z1M9 353 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 SPTLC2O15270 562 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 ZMYND10O75800 440 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 NUBP1P53384 320 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 GRIN1Q05586 938 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 RAB33AQ14088 237 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 NT5DC4Q86YG4 428 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 LINC00301Q8NCQ3 95 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 HASPINQ8TF76 798 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 DDX12PQ92771 950 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 EPSTI1Q96J88 318 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 MSTO1Q9BUK6 570 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms