RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 UROC1Q96N76 676 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 BCO2Q9BYV7 579 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 GOLGA2P5Q9HBQ8 144 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 LTB4R2Q9NPC1 389 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 SPATA6Q9NWH7 488 aaPredicted RBP12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 MTF2Q9Y483 593 aaPredicted RBP12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 BACE2Q9Y5Z0 518 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 MIA3Q5JRA6 1907 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 FAM170BA6NMN3 283 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 I3L4J1 428 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 LAMTOR5O43504 91 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 KINO60870 393 aaKnown RBP12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 MUTP22033 750 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 BRCC3P46736 316 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 EFNA5P52803 228 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 ORC2Q13416 577 aaPredicted RBP12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 ANKS3Q6ZW76 656 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 RTL10Q7L3V2 364 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 APBB1IPQ7Z5R6 666 aaPredicted RBP12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 C3orf58Q8NDZ4 430 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 RUBCNQ92622 972 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 OSBPL6Q9BZF3 934 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 BHMT2Q9H2M3 363 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 POLD4Q9HCU8 107 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 MRPS23Q9Y3D9 190 aaKnown RBP12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 FANCMQ8IYD8 2048 aa12.74□□□□□ -0.37
NSMCE1-209ENST00000565384 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 TRAPPC3O43617 180 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 ECI2O75521 394 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 RHOP08100 348 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 CD72P21854 359 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 MAGEA9P43362 315 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 NEK4P51957 841 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 ROR1Q01973 937 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 SOX4Q06945 474 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 ECM1Q16610 540 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 SLC5A9Q2M3M2 681 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 ZNF528Q3MIS6 628 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 TTC38Q5R3I4 469 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 TPRG1Q6ZUI0 275 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 DGLUCYQ7Z3D6 616 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 DCLK2Q8N568 766 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 CEP120Q8N960 986 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 SUMF1Q8NBK3 374 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 KIFAP3Q92845 792 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 MCRS1Q96EZ8 462 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 CDT1Q9H211 546 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 TNFSF13BQ9Y275 285 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 PATJQ8NI35 1801 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 VPS13AQ96RL7 3174 aa12.73□□□□□ -0.37
NSMCE1-209ENST00000565384 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 SPTBN4Q9H254 2564 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 SMIM28A0A1B0GU29 152 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 MED19A0JLT2 244 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 PODXLO00592 558 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 SPTLC1O15269 473 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 LRG1P02750 347 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 CEBPBP17676 345 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 TARSP26639 723 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 GRM5P41594 1212 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 PUM1Q14671 1186 aaKnown RBP eCLIP12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 ZNF568Q3ZCX4 644 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 SLC8B1Q6J4K2 584 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 POTEHQ6S545 545 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 ZNF461Q8TAF7 563 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 CCDC94Q9BW85 323 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 PLA2G2FQ9BZM2 168 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 TOPORSQ9NS56 1045 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 GDE1Q9NZC3 331 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 DCHS1Q96JQ0 3298 aa12.72□□□□□ -0.37
NSMCE1-209ENST00000565384 ARHGEF37A1IGU5 675 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 WDR27A2RRH5 827 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 K7ERI5 159 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 PTPN2P17706 415 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 ELF1P32519 619 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 PEX3P56589 373 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 OSTNP61366 133 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 CSTF1Q05048 431 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 XKR4Q5GH76 650 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 PRSS36Q5K4E3 855 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 ZBTB41Q5SVQ8 909 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 ALKAL1Q6UXT8 129 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 BORCS6Q96GS4 357 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 FOXP1Q9H334 677 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 PTPRHQ9HD43 1115 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 DDX19AQ9NUU7 478 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 SLC38A7Q9NVC3 462 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 LRWD1Q9UFC0 647 aa12.71□□□□□ -0.37
NSMCE1-209ENST00000565384 KIAA1024Q9UPX6 916 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms