RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ZFP37Q9Y6Q3 630 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-213ENST00000565173 NOTCH4Q99466 2003 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 I3L4J1 428 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 CCL16O15467 120 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 TBC1D4O60343 1298 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 HIP1RO75146 1068 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 B3GAT3O94766 335 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 PROZP22891 400 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 TKTP29401 623 aaKnown RBP9.43□□□□□ -0.9
CAPN3-213ENST00000565173 CDC25AP30304 524 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 GRM5P41594 1212 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 PEX3P56589 373 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 GPC5P78333 572 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 UVSSAQ2YD98 709 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 PPM1LQ5SGD2 360 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 AXDND1Q5T1B0 1012 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-213ENST00000565173 RINT1Q6NUQ1 792 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 C1orf186Q6ZWK4 172 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 RTL10Q7L3V2 364 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 KCNK18Q7Z418 384 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 ITFG1Q8TB96 612 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 SLC7A14Q8TBB6 771 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 SNX29Q8TEQ0 813 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 FGF13Q92913 245 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 NTPCRQ9BSD7 190 aaKnown RBP9.43□□□□□ -0.9
CAPN3-213ENST00000565173 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 CDT1Q9H211 546 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 TBC1D17Q9HA65 648 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 GOLGA2P5Q9HBQ8 144 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 HCFC1R1Q9NWW0 138 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 ARHGAP28Q9P2N2 729 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 DNMT3BQ9UBC3 853 aaKnown RBP9.43□□□□□ -0.9
CAPN3-213ENST00000565173 NOL7Q9UMY1 257 aaKnown RBP9.43□□□□□ -0.9
CAPN3-213ENST00000565173 DNM3Q9UQ16 869 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 BACE2Q9Y5Z0 518 aa9.43□□□□□ -0.9
CAPN3-213ENST00000565173 PTPRZ1P23471 2315 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-213ENST00000565173 CCDC169A6NNP5 214 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 LAD1O00515 517 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 ABLIM3O94929 683 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 DCNP07585 359 aaKnown RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 GLULP15104 373 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 PRPHP41219 470 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 BRCC3P46736 316 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 STARD6P59095 220 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 GNL2Q13823 731 aaKnown RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 MRPL58Q14197 206 aaKnown RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 HYIQ5T013 277 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 LIN9Q5TKA1 542 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 FAM184AQ8NB25 1140 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 NKD2Q969F2 451 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 ZBTB45Q96K62 511 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 UROC1Q96N76 676 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 TARS2Q9BW92 718 aaKnown RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 MRPL4Q9BYD3 311 aaKnown RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 ARHGEF3Q9NR81 526 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
CAPN3-213ENST00000565173 SIT1Q9Y3P8 196 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 STK24Q9Y6E0 443 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 CDY1Q9Y6F8 540 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 TRIP11Q15643 1979 aa9.42□□□□□ -0.9
CAPN3-213ENST00000565173 PHLPP2Q6ZVD8 1323 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 SFI1A8K8P3 1242 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 STK25O00506 426 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 TRAPPC3O43617 180 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 XYLBO75191 536 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 MCF2P10911 925 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 KCNE1P15382 129 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 OSTNP61366 133 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 DMP1Q13316 513 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-213ENST00000565173 ZNF568Q3ZCX4 644 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 C8orf34Q49A92 452 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 KRT79Q5XKE5 535 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 SLC8B1Q6J4K2 584 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 DTHD1Q6ZMT9 781 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 ANKS3Q6ZW76 656 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 APBB1IPQ7Z5R6 666 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-213ENST00000565173 NPAS3Q8IXF0 933 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 MAML2Q8IZL2 1156 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-213ENST00000565173 ZNF461Q8TAF7 563 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 SPIRE2Q8WWL2 714 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 C18orf25Q96B23 403 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-213ENST00000565173 SNX27Q96L92 541 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 DRC1Q96MC2 740 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 PNMA5Q96PV4 448 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 DDX23Q9BUQ8 820 aaKnown RBP9.41□□□□□ -0.9
CAPN3-213ENST00000565173 FOXQ1Q9C009 403 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 C17orf75Q9HAS0 396 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 KMT5AQ9NQR1 393 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 TOPORSQ9NS56 1045 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-213ENST00000565173 CNTN3Q9P232 1028 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 KCNH3Q9ULD8 1083 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 RBM19Q9Y4C8 960 aaKnown RBP9.41□□□□□ -0.9
CAPN3-213ENST00000565173 COL4A3Q01955 1670 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 GVINP1Q7Z2Y8 2422 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 FAM186AA6NE01 2351 aa9.41□□□□□ -0.9
CAPN3-213ENST00000565173 ARHGEF37A1IGU5 675 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 WDR27A2RRH5 827 aa9.4□□□□□ -0.9
CAPN3-213ENST00000565173 PODXLO00592 558 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms