RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 OSBPL6Q9BZF3 934 aa15.52■□□□□ 0.08
CDR2-204ENST00000564542 HCFC1R1Q9NWW0 138 aa15.52■□□□□ 0.08
CDR2-204ENST00000564542 DNMT3BQ9UBC3 853 aaKnown RBP15.52■□□□□ 0.08
CDR2-204ENST00000564542 BACE2Q9Y5Z0 518 aa15.52■□□□□ 0.08
CDR2-204ENST00000564542 CDY1Q9Y6F8 540 aa15.52■□□□□ 0.08
CDR2-204ENST00000564542 OTOGLQ3ZCN5 2332 aa15.52■□□□□ 0.07
CDR2-204ENST00000564542 TRAPPC3O43617 180 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 UPP1Q16831 310 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 ZNF528Q3MIS6 628 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 SLC44A4Q53GD3 710 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 ATF7IP2Q5U623 682 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 ANKS3Q6ZW76 656 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 APBB1IPQ7Z5R6 666 aaPredicted RBP15.51■□□□□ 0.07
CDR2-204ENST00000564542 RUBCNQ92622 972 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 KIFAP3Q92845 792 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 DDX27Q96GQ7 796 aaKnown RBP15.51■□□□□ 0.07
CDR2-204ENST00000564542 IFT74Q96LB3 600 aa15.51■□□□□ 0.07
CDR2-204ENST00000564542 CACNA1IQ9P0X4 2223 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 KINO60870 393 aaKnown RBP15.5■□□□□ 0.07
CDR2-204ENST00000564542 IGFBP6P24592 240 aaPredicted RBP15.5■□□□□ 0.07
CDR2-204ENST00000564542 TKTP29401 623 aaKnown RBP15.5■□□□□ 0.07
CDR2-204ENST00000564542 MAGEA9P43362 315 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 ST3GAL1Q11201 340 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 UBXN2BQ14CS0 331 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 NT5DC1Q5TFE4 455 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 CD300LGQ6UXG3 332 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 C3orf58Q8NDZ4 430 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 ING5Q8WYH8 240 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 BORCS6Q96GS4 357 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 LTB4R2Q9NPC1 389 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 AVENQ9NQS1 362 aaPredicted RBP15.5■□□□□ 0.07
CDR2-204ENST00000564542 SPATA6Q9NWH7 488 aaPredicted RBP15.5■□□□□ 0.07
CDR2-204ENST00000564542 GDE1Q9NZC3 331 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 FBXO4Q9UKT5 387 aa15.5■□□□□ 0.07
CDR2-204ENST00000564542 MRPS23Q9Y3D9 190 aaKnown RBP15.5■□□□□ 0.07
CDR2-204ENST00000564542 PHLPP2Q6ZVD8 1323 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 SPTLC1O15269 473 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 LAMTOR5O43504 91 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 ECI2O75521 394 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 NEK4P51957 841 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 GUCY1B3Q02153 619 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 SUMF1Q8NBK3 374 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 BHMT2Q9H2M3 363 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 GOLGA2P5Q9HBQ8 144 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 TOPORSQ9NS56 1045 aaPredicted RBP15.49■□□□□ 0.07
CDR2-204ENST00000564542 TNFSF13BQ9Y275 285 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 MTF2Q9Y483 593 aaPredicted RBP15.49■□□□□ 0.07
CDR2-204ENST00000564542 TRIP11Q15643 1979 aa15.49■□□□□ 0.07
CDR2-204ENST00000564542 SMIM28A0A1B0GU29 152 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 ARHGEF37A1IGU5 675 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 FAM170BA6NMN3 283 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 I3L4J1 428 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 RHOP08100 348 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 GRM5P41594 1212 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 YARSP54577 528 aaKnown RBP15.48■□□□□ 0.07
CDR2-204ENST00000564542 ROR1Q01973 937 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 ZNF174Q15697 407 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 ECM1Q16610 540 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 SLC5A9Q2M3M2 681 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 XKR4Q5GH76 650 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 SLC8B1Q6J4K2 584 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 TPRG1Q6ZUI0 275 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 DGLUCYQ7Z3D6 616 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 ZNF461Q8TAF7 563 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 FOXP1Q9H334 677 aaPredicted RBP15.48■□□□□ 0.07
CDR2-204ENST00000564542 SLC38A7Q9NVC3 462 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 PCDHGA2Q9Y5H1 932 aa15.48■□□□□ 0.07
CDR2-204ENST00000564542 K7ERI5 159 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 ABLIM3O94929 683 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 LRG1P02750 347 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 CD72P21854 359 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 CCT6AP40227 531 aaKnown RBP15.47■□□□□ 0.07
CDR2-204ENST00000564542 BRCC3P46736 316 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 FXR2P51116 673 aaKnown RBP eCLIP15.47■□□□□ 0.073e-8■■■■■ 33.1
CDR2-204ENST00000564542 SOX4Q06945 474 aaPredicted RBP15.47■□□□□ 0.07
CDR2-204ENST00000564542 PUM1Q14671 1186 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDR2-204ENST00000564542 ZNF568Q3ZCX4 644 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 TTC38Q5R3I4 469 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 VARS2Q5ST30 1063 aaKnown RBP15.47■□□□□ 0.07
CDR2-204ENST00000564542 ZBTB41Q5SVQ8 909 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 ALKAL1Q6UXT8 129 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 DCLK2Q8N568 766 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 CEP120Q8N960 986 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 CLDN23Q96B33 292 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 ELSPBP1Q96BH3 223 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 MCRS1Q96EZ8 462 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 C8orf76Q96K31 380 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 NELL2Q99435 816 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 CCDC94Q9BW85 323 aaPredicted RBP15.47■□□□□ 0.07
CDR2-204ENST00000564542 CDT1Q9H211 546 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 POLD4Q9HCU8 107 aa15.47■□□□□ 0.07
CDR2-204ENST00000564542 CEP250Q9BV73 2442 aa15.46■□□□□ 0.07
CDR2-204ENST00000564542 WDR27A2RRH5 827 aa15.46■□□□□ 0.07
CDR2-204ENST00000564542 PODXLO00592 558 aa15.46■□□□□ 0.07
CDR2-204ENST00000564542 PRRG1O14668 218 aa15.46■□□□□ 0.07
CDR2-204ENST00000564542 SYN3O14994 580 aa15.46■□□□□ 0.07
CDR2-204ENST00000564542 NCAM2O15394 837 aa15.46■□□□□ 0.07
CDR2-204ENST00000564542 CEBPBP17676 345 aa15.46■□□□□ 0.07
CDR2-204ENST00000564542 PTPN2P17706 415 aa15.46■□□□□ 0.07
CDR2-204ENST00000564542 TARSP26639 723 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms