RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 APOL6Q9BWW8 343 aa20.34■□□□□ 0.85
SPNS1-206ENST00000564476 TMEM8AQ9HCN3 771 aa20.34■□□□□ 0.85
SPNS1-206ENST00000564476 RTN4Q9NQC3 1192 aaKnown RBP20.34■□□□□ 0.85
SPNS1-206ENST00000564476 SLC38A7Q9NVC3 462 aa20.34■□□□□ 0.85
SPNS1-206ENST00000564476 INTS13Q9NVM9 706 aa20.34■□□□□ 0.85
SPNS1-206ENST00000564476 TTC3P53804 2025 aa20.34■□□□□ 0.85
SPNS1-206ENST00000564476 LTBP2Q14767 1821 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 TNNC2P02585 160 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 CYP3A5P20815 502 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 FMO5P49326 533 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 DLG4P78352 724 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 ZBTB6Q15916 424 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 C1orf220Q5T0J3 134 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 C16orf59Q7L2K0 433 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 RPS6KC1Q96S38 1066 aa20.33■□□□□ 0.85
SPNS1-206ENST00000564476 MTIF3Q9H2K0 278 aaKnown RBP20.33■□□□□ 0.85
SPNS1-206ENST00000564476 UBQLN1Q9UMX0 589 aaKnown RBP20.33■□□□□ 0.85
SPNS1-206ENST00000564476 SMIM28A0A1B0GU29 152 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 ARL5CA6NH57 179 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 MEFVO15553 781 aaPredicted RBP20.32■□□□□ 0.84
SPNS1-206ENST00000564476 OFD1O75665 1012 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 C4BPAP04003 597 aaKnown RBP20.32■□□□□ 0.84
SPNS1-206ENST00000564476 ACRP10323 421 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 SYN1P17600 705 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 PLCB2Q00722 1185 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 TMEM132DQ14C87 1099 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 TMEM240Q5SV17 173 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 JADE1Q6IE81 842 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 C15orf39Q6ZRI6 1047 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 ZNF365Q70YC5 407 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 SV2AQ7L0J3 742 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 RNF169Q8NCN4 708 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 BEST2Q8NFU1 509 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 TOP1MTQ969P6 601 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 KIF12Q96FN5 646 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 POP1Q99575 1024 aaKnown RBP20.32■□□□□ 0.84
SPNS1-206ENST00000564476 TRIM5Q9C035 493 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 IFNKQ9P0W0 207 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 COQ4Q9Y3A0 265 aa20.32■□□□□ 0.84
SPNS1-206ENST00000564476 RANBP2P49792 3224 aaKnown RBP20.32■□□□□ 0.84
SPNS1-206ENST00000564476 A0A1W2PQC6 194 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 PES1O00541 588 aaKnown RBP20.31■□□□□ 0.84
SPNS1-206ENST00000564476 AP5Z1O43299 807 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 THP07101 528 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 TMEM191BP0C7N4 346 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 TRIM49P0CI25 452 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 TRIM49CP0CI26 452 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 KCNJ6P48051 423 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 MXI1P50539 228 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 PPP3CAQ08209 521 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 ZACNQ401N2 412 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 ABI1Q8IZP0 508 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 URGCPQ8TCY9 931 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 HERVK_113Q902F9 699 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 ZNF516Q92618 1163 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 LPPQ93052 612 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 NAP1L5Q96NT1 182 aaPredicted RBP20.31■□□□□ 0.84
SPNS1-206ENST00000564476 GAD1Q99259 594 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 GDF15Q99988 308 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 TMEM117Q9H0C3 514 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 KLK14Q9P0G3 267 aa20.31■□□□□ 0.84
SPNS1-206ENST00000564476 MLH1P40692 756 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 GCLMP48507 274 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 WNT7BP56706 349 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 WDR5P61964 334 aaKnown RBP20.3■□□□□ 0.84
SPNS1-206ENST00000564476 TFAMQ00059 246 aaKnown RBP20.3■□□□□ 0.84
SPNS1-206ENST00000564476 UBXN1Q04323 297 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 GRIK3Q13003 919 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.3■□□□□ 0.84
SPNS1-206ENST00000564476 GBP6Q6ZN66 633 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 EFCAB13Q8IY85 973 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 GSTCDQ8NEC7 633 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 PHOSPHO2Q8TCD6 241 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 MRFAP1L1Q96HT8 127 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 ZMAT2Q96NC0 199 aaKnown RBP20.3■□□□□ 0.84
SPNS1-206ENST00000564476 PPP1R10Q96QC0 940 aaKnown RBP20.3■□□□□ 0.84
SPNS1-206ENST00000564476 ERGIC2Q96RQ1 377 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 XPO4Q9C0E2 1151 aaKnown RBP20.3■□□□□ 0.84
SPNS1-206ENST00000564476 PCDH10Q9P2E7 1040 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 ITGA11Q9UKX5 1188 aa20.3■□□□□ 0.84
SPNS1-206ENST00000564476 RBAK-RBAKDNI3L0D1 243 aa20.29■□□□□ 0.84
SPNS1-206ENST00000564476 PTGESO14684 152 aa20.29■□□□□ 0.84
SPNS1-206ENST00000564476 NFICP08651 508 aa20.29■□□□□ 0.84
SPNS1-206ENST00000564476 NOMO2Q5JPE7 1267 aa20.29■□□□□ 0.84
SPNS1-206ENST00000564476 TRAPPC11Q7Z392 1133 aa20.29■□□□□ 0.84
SPNS1-206ENST00000564476 FBXL13Q8NEE6 735 aa20.29■□□□□ 0.84
SPNS1-206ENST00000564476 ANP32BQ92688 251 aaKnown RBP20.29■□□□□ 0.84
SPNS1-206ENST00000564476 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.29■□□□□ 0.84
SPNS1-206ENST00000564476 MRPL9Q9BYD2 267 aaKnown RBP20.29■□□□□ 0.84
SPNS1-206ENST00000564476 R3HCC1Q9Y3T6 440 aaKnown RBP20.29■□□□□ 0.84
SPNS1-206ENST00000564476 TDRD15B5MCY1 1934 aaKnown RBP20.28■□□□□ 0.84
SPNS1-206ENST00000564476 A0A1W2PPC1 479 aa20.28■□□□□ 0.84
SPNS1-206ENST00000564476 MEIS3P2A8K0S8 358 aa20.28■□□□□ 0.84
SPNS1-206ENST00000564476 TULP1O00294 542 aaPredicted RBP20.28■□□□□ 0.84
SPNS1-206ENST00000564476 PHACTR2O75167 634 aa20.28■□□□□ 0.84
SPNS1-206ENST00000564476 DGKIO75912 1065 aa20.28■□□□□ 0.84
SPNS1-206ENST00000564476 PAX3P23760 479 aa20.28■□□□□ 0.84
SPNS1-206ENST00000564476 RPL9P32969 192 aaKnown RBP20.28■□□□□ 0.84
SPNS1-206ENST00000564476 MYL7Q01449 175 aa20.28■□□□□ 0.84
SPNS1-206ENST00000564476 BIRC3Q13489 604 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms