RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 POU2F2P09086 479 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 BRCC3P46736 316 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 TOB1P50616 345 aaPredicted RBP18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 STARD6P59095 220 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 PDXDC1Q6P996 788 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 ALKAL1Q6UXT8 129 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 TAS1R3Q7RTX0 852 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 ACO2Q99798 780 aaKnown RBP18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 PTPRHQ9HD43 1115 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 DDX19AQ9NUU7 478 aaKnown RBP18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 LRWD1Q9UFC0 647 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 TNFSF13BQ9Y275 285 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 TRIP11Q15643 1979 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 FRYLO94915 3013 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 MYH15Q9Y2K3 1946 aa18.47■□□□□ 0.55
HDGFL3-203ENST00000563404 SMIM28A0A1B0GU29 152 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 E9PMD0 336 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 K7ERI5 159 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 XYLBO75191 536 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 NPTX2P47972 431 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 SNW1Q13573 536 aaKnown RBP18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 UVSSAQ2YD98 709 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 XKR4Q5GH76 650 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 IGSF22Q8N9C0 903 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 PJA1Q8NG27 643 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 ZMAT2Q96NC0 199 aaKnown RBP18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 CDT1Q9H211 546 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 BACE2Q9Y5Z0 518 aa18.46■□□□□ 0.55
HDGFL3-203ENST00000563404 PP2D1A8MPX8 630 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 ABLIM1O14639 778 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 SP9P0CG40 484 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 GRM5P41594 1212 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 TRAPPC10P48553 1259 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 PEX3P56589 373 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 OSTNP61366 133 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 PDIA5Q14554 519 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 IL17AQ16552 155 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 SLC5A9Q2M3M2 681 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 NPAS3Q8IXF0 933 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 MAML2Q8IZL2 1156 aaPredicted RBP18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 SNX29Q8TEQ0 813 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 ING5Q8WYH8 240 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 UROC1Q96N76 676 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 KXD1Q9BQD3 176 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 MTF2Q9Y483 593 aaPredicted RBP18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 PCDHB6Q9Y5E3 794 aa18.45■□□□□ 0.54
HDGFL3-203ENST00000563404 DMXL1Q9Y485 3027 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 CCDC169A6NNP5 214 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 HIP1RO75146 1068 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 MAPK7Q13164 816 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 PTGDRQ13258 359 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 PABPC1LQ4VXU2 614 aaKnown RBP18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 MTSS1LQ765P7 747 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 KCNK18Q7Z418 384 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 C1orf210Q8IVY1 113 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 DDX23Q9BUQ8 820 aaKnown RBP18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 RUSC1Q9BVN2 902 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 TARS2Q9BW92 718 aaKnown RBP18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 TMEM134Q9H6X4 195 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 ARHGAP28Q9P2N2 729 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 KCNH3Q9ULD8 1083 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 PHLPP2Q6ZVD8 1323 aa18.44■□□□□ 0.54
HDGFL3-203ENST00000563404 EP300Q09472 2414 aaPredicted RBP18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 DNAH14Q0VDD8 3507 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 TBC1D4O60343 1298 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 LMNAP02545 664 aaKnown RBP18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 PROZP22891 400 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 U2AF2P26368 475 aaKnown RBP eCLIP18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 CDC25AP30304 524 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 HMGN5P82970 282 aaKnown RBP18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 ROR1Q01973 937 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 GNL2Q13823 731 aaKnown RBP18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 MLF2Q15773 248 aaPredicted RBP18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 ZNF568Q3ZCX4 644 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 SLC44A4Q53GD3 710 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 ANKS3Q6ZW76 656 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 KIF2CQ99661 725 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 MMTAG2Q9BU76 263 aaKnown RBP18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 PLA2G2FQ9BZM2 168 aa18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 NOL7Q9UMY1 257 aaKnown RBP18.43■□□□□ 0.54
HDGFL3-203ENST00000563404 CACNA1IQ9P0X4 2223 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 KANSL1LA0AUZ9 987 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 WDR27A2RRH5 827 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 PODXLO00592 558 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 NRG2O14511 850 aaPredicted RBP18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 TRAPPC3O43617 180 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 ABLIM3O94929 683 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 RHOP08100 348 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 VARS2Q5ST30 1063 aaKnown RBP18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 SLC8B1Q6J4K2 584 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 RINT1Q6NUQ1 792 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 C1orf186Q6ZWK4 172 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 RTL10Q7L3V2 364 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 TMEM130Q8N3G9 435 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 KCNG4Q8TDN1 519 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 C18orf25Q96B23 403 aaPredicted RBP18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 MCRS1Q96EZ8 462 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 SHDQ96IW2 340 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 ZBTB45Q96K62 511 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms