RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 KIF4AO95239 1232 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 RPN1P04843 607 aaKnown RBP9.31□□□□□ -0.92
UBR1-204ENST00000563239 MYL1P05976 194 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 CTSAP10619 480 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 MATR3P43243 847 aaKnown RBP eCLIP9.31□□□□□ -0.92
UBR1-204ENST00000563239 ACOT2P49753 483 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 CLCNKBP51801 687 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 RBM10P98175 930 aaKnown RBP9.31□□□□□ -0.92
UBR1-204ENST00000563239 TFF2Q03403 129 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 FAM160A1Q05DH4 1040 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 SPAG1Q07617 926 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 ADAM15Q13444 863 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 HSP90AA2PQ14568 343 aaPredicted RBP9.31□□□□□ -0.92
UBR1-204ENST00000563239 UPP1Q16831 310 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 KIAA0319Q5VV43 1072 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 PLPP4Q5VZY2 271 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 PDE12Q6L8Q7 609 aaKnown RBP9.31□□□□□ -0.92
UBR1-204ENST00000563239 CLEC17AQ6ZS10 378 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 C3orf58Q8NDZ4 430 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 VN1R2Q8NFZ6 395 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 MICAL1Q8TDZ2 1067 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 POMGNT1Q8WZA1 660 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 IPO9Q96P70 1041 aaKnown RBP9.31□□□□□ -0.92
UBR1-204ENST00000563239 HERC2P3Q9BVR0 1158 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 COLEC11Q9BWP8 271 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 TMEM206Q9H813 350 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 PLEKHA5Q9HAU0 1116 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 NGRNQ9NPE2 291 aaKnown RBP9.31□□□□□ -0.92
UBR1-204ENST00000563239 CHST7Q9NS84 486 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 AGO2Q9UKV8 859 aaKnown RBP9.31□□□□□ -0.92
UBR1-204ENST00000563239 EXOC7Q9UPT5 735 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 IRAK3Q9Y616 596 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 TMEM189-UBE2V1I3L0A0 370 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 RHOBTB3O94955 611 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 CXCL14O95715 111 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 GLP2RO95838 553 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 SOD2P04179 222 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 GARTP22102 1010 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 NRIP1P48552 1158 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 GUCY2FP51841 1108 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 POU5F1Q01860 360 aaKnown RBP9.3□□□□□ -0.92
UBR1-204ENST00000563239 DLX2Q07687 328 aaPredicted RBP9.3□□□□□ -0.92
UBR1-204ENST00000563239 PSMD2Q13200 908 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 PNOCQ13519 176 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 SMC1AQ14683 1233 aaKnown RBP9.3□□□□□ -0.92
UBR1-204ENST00000563239 POSTNQ15063 836 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 PTPN14Q15678 1187 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 KYAT1Q16773 422 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 DUSP6Q16828 381 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 FUT10Q6P4F1 479 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 DCLRE1AQ6PJP8 1040 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 TMC7Q7Z402 723 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 RBM23Q86U06 439 aaKnown RBP9.3□□□□□ -0.92
UBR1-204ENST00000563239 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.3□□□□□ -0.92
UBR1-204ENST00000563239 NELFCDQ8IXH7 590 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 SYCP3Q8IZU3 236 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 EFHBQ8N7U6 833 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 HASPINQ8TF76 798 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 HLA-CQ95604 372 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 PABPC5Q96DU9 382 aaKnown RBP9.3□□□□□ -0.92
UBR1-204ENST00000563239 SAAL1Q96ER3 474 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 B3GALT6Q96L58 329 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 TIGD1Q96MW7 591 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 FAM213AQ9BRX8 229 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 PCIF1Q9H4Z3 704 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 IGFLR1Q9H665 355 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 UBE2ZQ9H832 354 aaPredicted RBP9.3□□□□□ -0.92
UBR1-204ENST00000563239 RPF1Q9H9Y2 349 aaKnown RBP9.3□□□□□ -0.92
UBR1-204ENST00000563239 ENTPD7Q9NQZ7 604 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 AGPAT3Q9NRZ7 376 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 EXOC1Q9NV70 894 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 TUBGCP4Q9UGJ1 667 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 ADAM28Q9UKQ2 775 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 PDCD11Q14690 1871 aaKnown RBP9.3□□□□□ -0.92
UBR1-204ENST00000563239 UBE4BO95155 1302 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 BRWD1Q9NSI6 2320 aa9.3□□□□□ -0.92
UBR1-204ENST00000563239 C5orf42Q9H799 3197 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 GOLGA8IPA6NC78 632 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 GOLGA6L4A6NEF3 574 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 GOLGA8JA6NMD2 632 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 PODXLO00592 558 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 PPEF2O14830 753 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 EXTL3O43909 919 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 CLASP2O75122 1294 aaKnown RBP9.29□□□□□ -0.92
UBR1-204ENST00000563239 TBX10O75333 385 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 TADA2AO75478 443 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 NFICP08651 508 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 LRPAP1P30533 357 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 DSG1Q02413 1049 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 PPP2R3AQ06190 1150 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 KCNB1Q14721 858 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 SKIV2LQ15477 1246 aaKnown RBP9.29□□□□□ -0.92
UBR1-204ENST00000563239 KNOP1Q1ED39 458 aaKnown RBP9.29□□□□□ -0.92
UBR1-204ENST00000563239 RTP2Q5QGT7 225 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 SPATA1Q5VX52 437 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 SCARA3Q6AZY7 606 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 JADE1Q6IE81 842 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 KANK3Q6NY19 840 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 STXBP4Q6ZWJ1 553 aa9.29□□□□□ -0.92
UBR1-204ENST00000563239 EFCAB13Q8IY85 973 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms