RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 APOA5Q6Q788 366 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 LRSAM1Q6UWE0 723 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 B3GNT6Q6ZMB0 384 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SLFN11Q7Z7L1 901 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 GPR149Q86SP6 731 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SULF2Q8IWU5 870 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 KRT78Q8N1N4 520 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 EFHBQ8N7U6 833 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SLC4A11Q8NBS3 891 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 OR2W6PQ8NHA6 318 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 RFFLQ8WZ73 363 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SLC4A9Q96Q91 983 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 RIOK1Q9BRS2 568 aaKnown RBP5.14□□□□□ -1.59
SMG1-207ENST00000563235 GJB4Q9NTQ9 266 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 TEKT2Q9UIF3 430 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 KIF3AQ9Y496 699 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 NPATQ14207 1427 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 RHPN2P1A8MT19 583 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 MAPK13O15264 365 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SLC25A17O43808 307 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SRGAP2BP0DMP2 458 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 TROVE2P10155 538 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMG1-207ENST00000563235 RIPK4P57078 832 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 PSMC6P62333 389 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 HNRNPUQ00839 825 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMG1-207ENST00000563235 LRRC32Q14392 662 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 RNF220Q5VTB9 566 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SNX30Q5VWJ9 437 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 CEP135Q66GS9 1140 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 PGBD2Q6P3X8 592 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 FAM173BQ6P4H8 233 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 POTEAQ6S8J7 498 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 C15orf52Q6ZUT6 534 aaKnown RBP5.14□□□□□ -1.59
SMG1-207ENST00000563235 ZSCAN1Q8NBB4 408 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SMC1BQ8NDV3 1235 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 PIGOQ8TEQ8 1089 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 GRK7Q8WTQ7 553 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 MYO19Q96H55 970 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 PRAM1Q96QH2 718 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 CNPPD1Q9BV87 410 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 CARD14Q9BXL6 1004 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 PACSIN1Q9BY11 444 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 LRRC3Q9BY71 257 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 GCOM2Q9BZD3 368 aaPredicted RBP5.14□□□□□ -1.59
SMG1-207ENST00000563235 PAIP1Q9H074 479 aaKnown RBP5.14□□□□□ -1.59
SMG1-207ENST00000563235 MMADHCQ9H3L0 296 aaPredicted RBP5.14□□□□□ -1.59
SMG1-207ENST00000563235 JMJD4Q9H9V9 463 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 SEPT11Q9NVA2 429 aaKnown RBP5.14□□□□□ -1.59
SMG1-207ENST00000563235 PPP1R14DQ9NXH3 145 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 HMG20BQ9P0W2 317 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 HCSTQ9UBK5 93 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 CLEC4AQ9UMR7 237 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 GPSM3Q9Y4H4 160 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 USP3Q9Y6I4 520 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.14□□□□□ -1.59
SMG1-207ENST00000563235 IQGAP2Q13576 1575 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 KDRP35968 1356 aa5.14□□□□□ -1.59
SMG1-207ENST00000563235 TRIM43BA6NCK2 446 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 LGALS16A8MUM7 142 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 AP3D1O14617 1153 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 FFAR2O15552 330 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 PRODHO43272 600 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 BEST1O76090 585 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 LRG1P02750 347 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 CKBP12277 381 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 ZNF3P17036 446 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 RFC1P35251 1148 aaPredicted RBP5.13□□□□□ -1.59
SMG1-207ENST00000563235 FCGRTP55899 365 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 MYL6P60660 151 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 CREMQ03060 361 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 BTG3Q14201 252 aaPredicted RBP5.13□□□□□ -1.59
SMG1-207ENST00000563235 ACAP2Q15057 778 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 TRIM61Q5EBN2 209 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 NEK5Q6P3R8 708 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 DARS2Q6PI48 645 aaKnown RBP5.13□□□□□ -1.59
SMG1-207ENST00000563235 NPNTQ6UXI9 565 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 ZNF765Q7L2R6 523 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 FAM160B2Q86V87 743 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 MOGAT3Q86VF5 341 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 CCDC83Q8IWF9 413 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 EFCAB13Q8IY85 973 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 KIAA0319LQ8IZA0 1049 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 CCDC26Q8TAB7 109 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 ERMNQ8TAM6 284 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 ADAMTS15Q8TE58 950 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 RUBCNQ92622 972 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 KHSRPQ92945 711 aaKnown RBP eCLIP5.13□□□□□ -1.596e-8■■■□□ 16.4
SMG1-207ENST00000563235 TRIM43Q96BQ3 446 aaPredicted RBP5.13□□□□□ -1.59
SMG1-207ENST00000563235 NSUN4Q96CB9 384 aaKnown RBP5.13□□□□□ -1.59
SMG1-207ENST00000563235 TMEM41AQ96HV5 264 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 C7orf26Q96N11 449 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 KCNC2Q96PR1 638 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 TCF12Q99081 682 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 NAP1L3Q99457 506 aaPredicted RBP5.13□□□□□ -1.59
SMG1-207ENST00000563235 NT5C3AQ9H0P0 336 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 TMEM60Q9H2L4 133 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 BICC1Q9H694 974 aaKnown RBP5.13□□□□□ -1.59
SMG1-207ENST00000563235 SYNCQ9H7C4 482 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 RXFP3Q9NSD7 469 aa5.13□□□□□ -1.59
SMG1-207ENST00000563235 ANO10Q9NW15 660 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms