RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SNX33Q8WV41 574 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 PTCD3Q96EY7 689 aaKnown RBP4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 TTC1Q99614 292 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 WNT8AQ9H1J5 351 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 IFT22Q9H7X7 185 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 ZMAT4Q9H898 229 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 TMEM74BQ9NUR3 256 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 SPTLC3Q9NUV7 552 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 KLHL11Q9NVR0 708 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 NUMBLQ9Y6R0 609 aa4.37□□□□□ -1.71
HDGFL3-202ENST00000562702 CCDC151A5D8V7 595 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 KCNAB3O43448 404 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 ZEB2O60315 1214 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 VIL1P09327 827 aaKnown RBP4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 CPEP16870 476 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 BPIP17213 487 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 CNGA1P29973 690 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 CRHR1P34998 444 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 CXADRP78310 365 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 ATP13A4Q4VNC1 1196 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 ZNF610Q8N9Z0 462 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 HASPINQ8TF76 798 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 FUBP3Q96I24 572 aaKnown RBP eCLIP4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 EMC7Q9NPA0 242 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 GPRC5DQ9NZD1 345 aa4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 APOBEC2Q9Y235 224 aaKnown RBP4.36□□□□□ -1.71
HDGFL3-202ENST00000562702 A0A1B0GTW7 788 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 TGM5O43548 720 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 PEX1O43933 1283 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 BRINP1O60477 761 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 RAB11FIP3O75154 756 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 STRN3Q13033 797 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 TERF2Q15554 542 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 FAM47AQ5JRC9 791 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 RRP12Q5JTH9 1297 aaKnown RBP4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 RNF187Q5TA31 235 aaPredicted RBP4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 B3GNTL1Q67FW5 361 aaPredicted RBP4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 KRT26Q7Z3Y9 468 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 UBR7Q8N806 425 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 ZNF480Q8WV37 535 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 SLC5A5Q92911 643 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 FCRL4Q96PJ5 515 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 NEU1Q99519 415 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 CPNE5Q9HCH3 593 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 IL17RBQ9NRM6 502 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 KCTD5Q9NXV2 234 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 KCNE5Q9UJ90 142 aa4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 MTO1Q9Y2Z2 717 aaKnown RBP4.35□□□□□ -1.71
HDGFL3-202ENST00000562702 NEMP1O14524 444 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 ULK1O75385 1050 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 GPANK1O95872 356 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 CELA2AP08217 269 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 ELANEP08246 267 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 SOX10P56693 466 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 BROXQ5VW32 411 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 FRMD7Q6ZUT3 714 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 MED25Q71SY5 747 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 DRC7Q8IY82 874 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 AFAP1L2Q8N4X5 818 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 OR14C36Q8NHC7 312 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 ZBTB9Q96C00 473 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 CEP95Q96GE4 821 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 TIMP4Q99727 224 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 SPC25Q9HBM1 224 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 ENTPD2Q9Y5L3 495 aa4.34□□□□□ -1.71
HDGFL3-202ENST00000562702 CADPSQ9ULU8 1353 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 ZNF804BA4D1E1 1349 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 KDM1AO60341 852 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 PHF2O75151 1096 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 PRKCGP05129 697 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 WT1P19544 449 aaPredicted RBP4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 PTPN7P35236 360 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 SESN3P58005 492 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 PROK1P58294 105 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 ZBTB41Q5SVQ8 909 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 PRAMEF14Q5SWL7 426 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 STRA8Q7Z7C7 330 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 RASSF3Q86WH2 238 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 SARAFQ96BY9 339 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 ZNF496Q96IT1 587 aaPredicted RBP4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 ZSWIM1Q9BR11 485 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 ANO3Q9BYT9 981 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 PRSS50Q9UI38 385 aa4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 NOC2LQ9Y3T9 749 aaKnown RBP4.33□□□□□ -1.72
HDGFL3-202ENST00000562702 PRSS38A1L453 326 aa4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 MANSC4A6NHS7 340 aaPredicted RBP4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 ERN1O75460 977 aaKnown RBP4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 RAP2BP61225 183 aa4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 MFSD14BQ5SR56 506 aa4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 ABHD15Q6UXT9 468 aa4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 LNX2Q8N448 690 aa4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 DDB2Q92466 427 aa4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 EVLQ9UI08 416 aaPredicted RBP4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 MCM8Q9UJA3 840 aa4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 WNT6Q9Y6F9 365 aa4.32□□□□□ -1.72
HDGFL3-202ENST00000562702 CNTNAP2Q9UHC6 1331 aa4.31□□□□□ -1.72
HDGFL3-202ENST00000562702 CXorf49A8MYA2 514 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms