RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 ANAPC15P60006 121 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 TRIM29Q14134 588 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 GLRA4Q5JXX5 417 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 DCLK2Q8N568 766 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
BBS4-205ENST00000562219 ING5Q8WYH8 240 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 PPP1R10Q96QC0 940 aaKnown RBP11.31□□□□□ -0.6
BBS4-205ENST00000562219 NACC1Q96RE7 527 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
BBS4-205ENST00000562219 TMEM60Q9H2L4 133 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 LTB4R2Q9NPC1 389 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 DLL3Q9NYJ7 618 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 GDE1Q9NZC3 331 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
BBS4-205ENST00000562219 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
BBS4-205ENST00000562219 MTF2Q9Y483 593 aaPredicted RBP11.31□□□□□ -0.6
BBS4-205ENST00000562219 BACE2Q9Y5Z0 518 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 F5P12259 2224 aa11.31□□□□□ -0.6
BBS4-205ENST00000562219 ANK1P16157 1881 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 NUP210Q8TEM1 1887 aaPredicted RBP11.3□□□□□ -0.6
BBS4-205ENST00000562219 NCOR2Q9Y618 2525 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 ARHGEF35A5YM69 484 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 FAM170BA6NMN3 283 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 TRAPPC3O43617 180 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 ECI2O75521 394 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 LIG1P18858 919 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 CYP11B2P19099 503 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 RPA1P27694 616 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 TKTP29401 623 aaKnown RBP11.3□□□□□ -0.6
BBS4-205ENST00000562219 MCM7P33993 719 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 CLCNKBP51801 687 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 EFNA5P52803 228 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 FOSBP53539 338 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 ME3Q16798 604 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 UPP1Q16831 310 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 SLC5A9Q2M3M2 681 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 ZBTB41Q5SVQ8 909 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 ATF7IP2Q5U623 682 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 EEF1DP3Q658K8 133 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 ANKS3Q6ZW76 656 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 APBB1IPQ7Z5R6 666 aaPredicted RBP11.3□□□□□ -0.6
BBS4-205ENST00000562219 ERMNQ8TAM6 284 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 ATRIPQ8WXE1 791 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
BBS4-205ENST00000562219 UROC1Q96N76 676 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 AVENQ9NQS1 362 aaPredicted RBP11.3□□□□□ -0.6
BBS4-205ENST00000562219 NCDNQ9UBB6 729 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
BBS4-205ENST00000562219 NCAM2O15394 837 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 LARGE1O95461 756 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 RHOP08100 348 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 CD72P21854 359 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
BBS4-205ENST00000562219 TARSP26639 723 aaKnown RBP11.29□□□□□ -0.6
BBS4-205ENST00000562219 RPS9P46781 194 aaKnown RBP11.29□□□□□ -0.6
BBS4-205ENST00000562219 CSTF1Q05048 431 aaKnown RBP11.29□□□□□ -0.6
BBS4-205ENST00000562219 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
BBS4-205ENST00000562219 HAUS3Q68CZ6 603 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 ZBTB44Q8NCP5 570 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 C3orf58Q8NDZ4 430 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 ZNF461Q8TAF7 563 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 NELL1Q92832 810 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 CLDN23Q96B33 292 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 IFT74Q96LB3 600 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 NELL2Q99435 816 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 KIFC3Q9BVG8 833 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 TOPORSQ9NS56 1045 aaPredicted RBP11.29□□□□□ -0.6
BBS4-205ENST00000562219 ZSCAN32Q9NX65 697 aa11.29□□□□□ -0.6
BBS4-205ENST00000562219 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
BBS4-205ENST00000562219 KIF26AQ9ULI4 1882 aaPredicted RBP11.29□□□□□ -0.6
BBS4-205ENST00000562219 CACNA1BQ00975 2339 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 ARHGEF37A1IGU5 675 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 I3L4J1 428 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 PRRG1O14668 218 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 JAK2O60674 1132 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 LRG1P02750 347 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 OR52Z1P0C646 297 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 CEBPBP17676 345 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 MUTP22033 750 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 YARSP54577 528 aaKnown RBP11.28□□□□□ -0.6
BBS4-205ENST00000562219 ROR1Q01973 937 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 ORC2Q13416 577 aaPredicted RBP11.28□□□□□ -0.6
BBS4-205ENST00000562219 SAFBQ15424 915 aaKnown RBP eCLIP11.28□□□□□ -0.6
BBS4-205ENST00000562219 RSPO4Q2I0M5 234 aaPredicted RBP11.28□□□□□ -0.6
BBS4-205ENST00000562219 NT5DC1Q5TFE4 455 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 SLC8B1Q6J4K2 584 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 CD300LGQ6UXG3 332 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 ZNF852Q6ZMS4 543 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
BBS4-205ENST00000562219 KIFAP3Q92845 792 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 DNASE1L2Q92874 299 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 SECISBP2LQ93073 1101 aaKnown RBP11.28□□□□□ -0.6
BBS4-205ENST00000562219 ELSPBP1Q96BH3 223 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 MCRS1Q96EZ8 462 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 PLA2G2FQ9BZM2 168 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 EPC1Q9H2F5 836 aa11.28□□□□□ -0.6
BBS4-205ENST00000562219 GOLGA2P5Q9HBQ8 144 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms