RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 TRIM11Q96F44 468 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 LRRC1Q9BTT6 524 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 PI4K2AQ9BTU6 479 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 UBXN6Q9BZV1 441 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 IMPG2Q9BZV3 1241 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 VIPAS39Q9H9C1 493 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 OSGEPQ9NPF4 335 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 PRMT7Q9NVM4 692 aaPredicted RBP13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 SMARCAL1Q9NZC9 954 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 STIM2Q9P246 746 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 CTTNBP2NLQ9P2B4 639 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 UVRAGQ9P2Y5 699 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 TMEM59LQ9UK28 342 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 CPSF3Q9UKF6 684 aaKnown RBP13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 PCDHB2Q9Y5E7 798 aa13.58□□□□□ -0.24
AC055717.2-201ENST00000561864 CEP104O60308 925 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 PHACTR2O75167 634 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 MYBL1P10243 752 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 HOXD8P13378 290 aaPredicted RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 ACO1P21399 889 aaKnown RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 DNA2P51530 1060 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 NOP14P78316 857 aaKnown RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 POU5F1Q01860 360 aaKnown RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 MBTD1Q05BQ5 628 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 GABPB1Q06547 395 aaPredicted RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 ATF7IP2Q5U623 682 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 LMBRD2Q68DH5 695 aaPredicted RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 ACAD10Q6JQN1 1059 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 EFCAB12Q6NXP0 572 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 MAML3Q96JK9 1138 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 RPS6KC1Q96S38 1066 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 TCHPQ9BT92 498 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 CARD9Q9H257 536 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 GOLPH3Q9H4A6 298 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 SLC5A4Q9NY91 659 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 COG5Q9UP83 839 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 CNTN6Q9UQ52 1028 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 TNFSF13BQ9Y275 285 aa13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 NOC2LQ9Y3T9 749 aaKnown RBP13.57□□□□□ -0.24
AC055717.2-201ENST00000561864 DDX3YO15523 660 aaKnown RBP13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 CLSTN1O94985 981 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 IL18RAPO95256 599 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 SNAI1O95863 264 aaPredicted RBP13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 INSRRP14616 1297 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 CLCN3P51790 818 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 NCOA4Q13772 614 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 CASP8Q14790 479 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 KYAT1Q16773 422 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 GLIPR1L2Q4G1C9 344 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 TMEM63BQ5T3F8 832 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 ZBTB33Q86T24 672 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 DPP9Q86TI2 863 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 IFT20Q8IY31 132 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 SMC1BQ8NDV3 1235 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 OR5B17Q8NGF7 314 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 AFG1LQ8WV93 481 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 TRAPPC12Q8WVT3 735 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 ZNF653Q96CK0 615 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 NLRP4Q96MN2 994 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 NAP1L3Q99457 506 aaPredicted RBP13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 ABHD16BQ9H3Z7 469 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 PTPRHQ9HD43 1115 aa13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 AVENQ9NQS1 362 aaPredicted RBP13.56□□□□□ -0.24
AC055717.2-201ENST00000561864 A0A0U1RQG5 324 aaPredicted RBP13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 TTLL13PA6NNM8 815 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 INO80B-WBP1J3KQ70 363 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 ASS1P00966 412 aaKnown RBP13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 TMOD1P28289 359 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 ADCYAP1R1P41586 468 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 FAM193AP78312 1265 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 TNFAIP2Q03169 654 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 MKRN3Q13064 507 aaKnown RBP13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 NNTQ13423 1086 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 SMC1AQ14683 1233 aaKnown RBP13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 PPP2R5EQ16537 467 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 DUOXA2Q1HG44 320 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 DUSP28Q4G0W2 176 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 IQSEC1Q6DN90 963 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 EMBQ6PCB8 327 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 UBL4BQ8N7F7 174 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 UBR7Q8N806 425 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 EIF1ADQ8N9N8 165 aaKnown RBP13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 AENQ8WTP8 325 aaKnown RBP13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 INO80BQ9C086 356 aaPredicted RBP13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 APOBEC3GQ9HC16 384 aaKnown RBP13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 GDF3Q9NR23 364 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 PCDHB4Q9Y5E5 795 aa13.55□□□□□ -0.24
AC055717.2-201ENST00000561864 ZEB2O60315 1214 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 B4GALT4O60513 344 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 TNNC2P02585 160 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms