RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PTPN14Q15678 1187 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 CLUL1Q15846 466 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 LLGL2Q6P1M3 1020 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 C18orf25Q96B23 403 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 FAM212AQ96EL1 285 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 CDCA3Q99618 268 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 HERC2P3Q9BVR0 1158 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 GPR62Q9BZJ7 368 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 RPF1Q9H9Y2 349 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 SLC38A7Q9NVC3 462 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 AGO2Q9UKV8 859 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 GLP2RO95838 553 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 ADSSP30520 456 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 LTBRP36941 435 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 ADAM15Q13444 863 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 ENOX2Q16206 610 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 TJAP1Q5JTD0 557 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 B3GALT6Q96L58 329 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 TMEM206Q9H813 350 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 MRPL17Q9NRX2 175 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 CPSF3Q9UKF6 684 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 BARX2Q9UMQ3 279 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 STYXL1Q9Y6J8 313 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 SF3B1O75533 1304 aaKnown RBP eCLIP21.69■■□□□ 1.061e-6■■■■■ 66.8
TSPAN3-210ENST00000561277 TTC26A0AVF1 554 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 B3GAT3O94766 335 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 KIAA1841Q6NSI8 718 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 RNF168Q8IYW5 571 aaPredicted RBP21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 VN1R2Q8NFZ6 395 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 KIF12Q96FN5 646 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 UROC1Q96N76 676 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 PLEKHA5Q9HAU0 1116 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 SLC39A2Q9NP94 309 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 EXOC1Q9NV70 894 aa21.69■■□□□ 1.06
TSPAN3-210ENST00000561277 PVALEFA0A1B0GWK0 134 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 LACTBL1A8MY62 500 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 TULP1O00294 542 aaPredicted RBP21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 EIF3DO15371 548 aaKnown RBP eCLIP21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 ZNF202O95125 648 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 EFEMP2O95967 443 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 GLUD2P49448 558 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 EHHADHQ08426 723 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 POSTNQ15063 836 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 UPP1Q16831 310 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 KRBA2Q6ZNG9 492 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 NOC3LQ8WTT2 800 aaKnown RBP21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 SAAL1Q96ER3 474 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 CHMP5Q9NZZ3 219 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 TUBGCP4Q9UGJ1 667 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 IRAK3Q9Y616 596 aa21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 PDCD11Q14690 1871 aaKnown RBP21.68■■□□□ 1.06
TSPAN3-210ENST00000561277 FSD2A1L4K1 749 aa21.67■■□□□ 1.06
TSPAN3-210ENST00000561277 PODXLO00592 558 aa21.67■■□□□ 1.06
TSPAN3-210ENST00000561277 PRR29P0C7W0 189 aa21.67■■□□□ 1.06
TSPAN3-210ENST00000561277 IGFBP6P24592 240 aaPredicted RBP21.67■■□□□ 1.06
TSPAN3-210ENST00000561277 LEXMQ3ZCV2 418 aa21.67■■□□□ 1.06
TSPAN3-210ENST00000561277 NELFCDQ8IXH7 590 aa21.67■■□□□ 1.06
TSPAN3-210ENST00000561277 CBWD1Q9BRT8 395 aa21.67■■□□□ 1.06
TSPAN3-210ENST00000561277 FAM213AQ9BRX8 229 aa21.67■■□□□ 1.06
TSPAN3-210ENST00000561277 KLRC4O43908 158 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 CLASP2O75122 1294 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 USP41Q3LFD5 358 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 ARMCX5Q6P1M9 558 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 DCLRE1AQ6PJP8 1040 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 EPM2AIP1Q7L775 607 aaPredicted RBP21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 CEP57Q86XR8 500 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 TMEM130Q8N3G9 435 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 C3orf58Q8NDZ4 430 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 EMILIN2Q9BXX0 1053 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 PCIF1Q9H4Z3 704 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 HCFC2Q9Y5Z7 792 aa21.66■■□□□ 1.06
TSPAN3-210ENST00000561277 CNPP09543 421 aaKnown RBP21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 GARTP22102 1010 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 HOXD13P35453 343 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 KMT5BQ4FZB7 885 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 FAM171A1Q5VUB5 890 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 JADE1Q6IE81 842 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 ZSWIM2Q8NEG5 633 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 SCFD1Q8WVM8 642 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 DDX27Q96GQ7 796 aaKnown RBP21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 CLEC1BQ9P126 229 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 GOLGA8IPA6NC78 632 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 GOLGA8JA6NMD2 632 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 TMEM189-UBE2V1I3L0A0 370 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 RPN1P04843 607 aaKnown RBP21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 MYL1P05976 194 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 SRGAP2BP0DMP2 458 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 DSG1Q02413 1049 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 KIAA0319Q5VV43 1072 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 PTCRAQ6ISU1 281 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 CRELD2Q6UXH1 353 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 FMR1NBQ8N0W7 255 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 ZNF507Q8TCN5 953 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 RIN2Q8WYP3 895 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 KLHL5Q96PQ7 755 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 CHST7Q9NS84 486 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 UBQLN1Q9UMX0 589 aaKnown RBP21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 SSX2IPQ9Y2D8 614 aa21.65■■□□□ 1.06
TSPAN3-210ENST00000561277 C5orf42Q9H799 3197 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms