RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 AXLP30530 894 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 HOXA11P31270 313 aaPredicted RBP10.63□□□□□ -0.71
HERC1-210ENST00000560897 CTHP32929 405 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 VIPR2P41587 438 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 PCBP1Q15365 356 aaKnown RBP eCLIP10.63□□□□□ -0.71
HERC1-210ENST00000560897 PRSS36Q5K4E3 855 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.63□□□□□ -0.71
HERC1-210ENST00000560897 TMTC3Q6ZXV5 915 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 EXOC8Q8IYI6 725 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 ZNF713Q8N859 430 aaPredicted RBP10.63□□□□□ -0.71
HERC1-210ENST00000560897 ZSCAN18Q8TBC5 510 aaPredicted RBP10.63□□□□□ -0.71
HERC1-210ENST00000560897 PSPC1Q8WXF1 523 aaKnown RBP10.63□□□□□ -0.71
HERC1-210ENST00000560897 SLC7A3Q8WY07 619 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 SH2D3AQ9BRG2 576 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 TEKT3Q9BXF9 490 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 EIF2AQ9BY44 585 aaKnown RBP10.63□□□□□ -0.71
HERC1-210ENST00000560897 PARP2Q9UGN5 583 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 RCAN3Q9UKA8 241 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 CDY1Q9Y6F8 540 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 SPAARA0A1B0GVQ0 90 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 MYBPHLA2RUH7 354 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 CASTOR2A6NHX0 329 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 E7EWF7 191 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 CHADO15335 359 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 KIF4AO95239 1232 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 CYP21A2P08686 494 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 HOXC13P31276 330 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 LMAN2Q12907 356 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 TUSC3Q13454 348 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 CCINQ13939 588 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 MIER3Q7Z3K6 550 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 CYP2U1Q7Z449 544 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 C11orf74Q86VG3 221 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 CAMKK1Q8N5S9 505 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 TCEAL4Q96EI5 215 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 CSRNP2Q9H175 543 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 DUSP15Q9H1R2 295 aaPredicted RBP10.62□□□□□ -0.71
HERC1-210ENST00000560897 CACNA2D2Q9NY47 1150 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 SLC12A7Q9Y666 1083 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 EML5Q05BV3 1969 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 ASXL3Q9C0F0 2248 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 CACNA1EQ15878 2313 aa10.62□□□□□ -0.71
HERC1-210ENST00000560897 VWA8A3KMH1 1905 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 ARHGEF37A1IGU5 675 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 TMEM150BA6NC51 233 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 ARNTLO00327 626 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 DPYSL4O14531 572 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 AKAP5P24588 427 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 CLK2P49760 499 aaKnown RBP10.61□□□□□ -0.71
HERC1-210ENST00000560897 ANTXR2P58335 489 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 ZNF423Q2M1K9 1284 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 LRCH2Q5VUJ6 765 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 TYW1BQ6NUM6 668 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 TXNDC11Q6PKC3 985 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 MICU3Q86XE3 530 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 RAB11FIP4Q86YS3 637 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 HDDC3Q8N4P3 179 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 CHCHD4Q8N4Q1 142 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 RNF149Q8NC42 400 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 LEMD2Q8NC56 503 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 RDM1Q8NG50 284 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 TTC8Q8TAM2 541 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 CPB2Q96IY4 423 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 NUSAP1Q9BXS6 441 aaKnown RBP10.61□□□□□ -0.71
HERC1-210ENST00000560897 GPR88Q9GZN0 384 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 NXF3Q9H4D5 531 aaKnown RBP10.61□□□□□ -0.71
HERC1-210ENST00000560897 MINDY3Q9H8M7 445 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 ASAH2Q9NR71 780 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 KLK14Q9P0G3 267 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 MTRRQ9UBK8 725 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 CACNG4Q9UBN1 327 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 SSUH2Q9Y2M2 353 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 FREM2Q5SZK8 3169 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 ZMYM2Q9UBW7 1377 aa10.61□□□□□ -0.71
HERC1-210ENST00000560897 THADAQ6YHU6 1953 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 FAM221BA6H8Z2 402 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 INO80B-WBP1J3KQ70 363 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 CDX4O14627 284 aaPredicted RBP10.6□□□□□ -0.71
HERC1-210ENST00000560897 TSPAN1O60635 241 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 MYL4P12829 197 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 MAPK8P45983 427 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 ATXN3P54252 364 aaPredicted RBP10.6□□□□□ -0.71
HERC1-210ENST00000560897 LAMTOR4Q0VGL1 99 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 GRSF1Q12849 480 aaKnown RBP eCLIP10.6□□□□□ -0.71
HERC1-210ENST00000560897 PTPAQ15257 358 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 ANKS3Q6ZW76 656 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 ZNF605Q86T29 641 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 MB21D2Q8IYB1 491 aaPredicted RBP10.6□□□□□ -0.71
HERC1-210ENST00000560897 FANCBQ8NB91 859 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 TCP11Q8WWU5 503 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 PRPF31Q8WWY3 499 aaKnown RBP10.6□□□□□ -0.71
HERC1-210ENST00000560897 TMEM87BQ96K49 555 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 ZNF512Q96ME7 567 aaPredicted RBP10.6□□□□□ -0.71
HERC1-210ENST00000560897 ZSWIM3Q96MP5 696 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 HHIPQ96QV1 700 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 UBL7Q96S82 380 aaPredicted RBP10.6□□□□□ -0.71
HERC1-210ENST00000560897 RIT2Q99578 217 aa10.6□□□□□ -0.71
HERC1-210ENST00000560897 PAAF1Q9BRP4 392 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms