RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	TRIM25	Q14258	630 aa	Known RBP	5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	FAM47A	Q5JRC9	791 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	LYSMD2	Q8IV50	215 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	MRFAP1L1	Q96HT8	127 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	GPR101	Q96P66	508 aa	Predicted RBP	5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	TIMP4	Q99727	224 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	PRDM12	Q9H4Q4	367 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	ENTPD2	Q9Y5L3	495 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	NUMBL	Q9Y6R0	609 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	ERN1	O75460	977 aa	Known RBP	5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	LSP1	P33241	339 aa		5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	CRHR1	P34998	444 aa		5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	EIF2B5	Q13144	721 aa	Known RBP	5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	KLF9	Q13886	244 aa	Predicted RBP	5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	ZNF626	Q68DY1	528 aa		5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	C11orf87	Q6NUJ2	197 aa		5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	CNNM4	Q6P4Q7	775 aa		5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	FOXR2	Q6PJQ5	311 aa		5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	LNX2	Q8N448	690 aa		5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	OR14C36	Q8NHC7	312 aa		5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	ZNF48	Q96MX3	618 aa	Predicted RBP	5.09	□□□□□ -1.59
SLTM-223	ENST00000560532	FAM83G	A6ND36	823 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	ORC4	O43929	436 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	CBSL	P0DN79	551 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	CBS	P35520	551 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	MAPK10	P53779	464 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	ETFDH	Q16134	617 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	GEN1	Q17RS7	908 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	RRP12	Q5JTH9	1297 aa	Known RBP	5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	GPR158	Q5T848	1215 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	PEG10	Q86TG7	708 aa	Known RBP	5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	SLC41A1	Q8IVJ1	513 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	ZNF610	Q8N9Z0	462 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	SPTLC3	Q9NUV7	552 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	TMEM260	Q9NX78	707 aa		5.08	□□□□□ -1.6
SLTM-223	ENST00000560532	ZNF521	Q96K83	1311 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	WNT10B	O00744	389 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	PRSS23	O95084	383 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	PRR35	P0CG20	571 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	WT1	P19544	449 aa	Predicted RBP	5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	GCSH	P23434	173 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	SLC6A2	P23975	617 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	FOLR3	P41439	243 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	MANF	P55145	182 aa	Known RBP	5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	SART3	Q15020	963 aa	Known RBP	5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	SF3B3	Q15393	1217 aa	Known RBP	5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	FCRLB	Q6BAA4	426 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	LRRTM3	Q86VH5	581 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	DRC7	Q8IY82	874 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	COLGALT2	Q8IYK4	626 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	TRMT2A	Q8IZ69	625 aa	Known RBP	5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	KCNG1	Q9UIX4	513 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	CD2AP	Q9Y5K6	639 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	CDY2A	Q9Y6F7	541 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	WNT6	Q9Y6F9	365 aa		5.07	□□□□□ -1.6
SLTM-223	ENST00000560532	TRGV11	A0A075B6L2	103 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	RAP2A	P10114	183 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	POU3F2	P20265	443 aa	Predicted RBP	5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	PHC1	P78364	1004 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	SSBP2	P81877	361 aa	Predicted RBP	5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	TERF2	Q15554	542 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	LCE1E	Q5T753	118 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	RUSC1-AS1	Q66K80	236 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	FRMD7	Q6ZUT3	714 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	SMC1B	Q8NDV3	1235 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	RNPC3	Q96LT9	517 aa	Known RBP	5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	WAC	Q9BTA9	647 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	MRI1	Q9BV20	369 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	SIK3	Q9Y2K2	1263 aa		5.06	□□□□□ -1.6
SLTM-223	ENST00000560532	AOX1	Q06278	1338 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	YY2	O15391	372 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	KDM1A	O60341	852 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	RAB11FIP3	O75154	756 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	ADSL	P30566	484 aa	Predicted RBP	5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	SREBF1	P36956	1147 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	CCT4	P50991	539 aa	Known RBP	5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	SCNN1B	P51168	640 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	LLGL1	Q15334	1064 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	AFMID	Q63HM1	303 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	KAZN	Q674X7	775 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	SPATA3	Q8NHX4	192 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	RSAD2	Q8WXG1	361 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	TFAP2B	Q92481	460 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	RPL36AL	Q969Q0	106 aa	Known RBP	5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	RGMA	Q96B86	450 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	FLRT1	Q9NZU1	646 aa		5.05	□□□□□ -1.6
SLTM-223	ENST00000560532	RPTOR	Q8N122	1335 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	POMC	P01189	267 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	LPL	P06858	475 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	ELFN1	P0C7U0	828 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	ALOX15	P16050	662 aa	Predicted RBP	5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	CCKBR	P32239	447 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	GRIA3	P42263	894 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	IL2	P60568	153 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	TUBA4A	P68366	448 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	OCRL	Q01968	901 aa		5.04	□□□□□ -1.6
SLTM-223	ENST00000560532	GRM1	Q13255	1194 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms