RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 INO80B-WBP1J3KQ70 363 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CPLX1O14810 134 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 ZNF263O14978 683 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 ASAP2O43150 1006 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 PTPN2P17706 415 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 PSMC3P17980 439 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 AKAP5P24588 427 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CCNE1P24864 410 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 ELF1P32519 619 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 PSMC5P62195 406 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 ZNF252P-AS1Q0IIN9 211 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 LAMTOR4Q0VGL1 99 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 STK3Q13188 491 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 PKP1Q13835 747 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 PFKFB3Q16875 520 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-215ENST00000560424 PLA2G4FQ68DD2 849 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 LRSAM1Q6UWE0 723 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 RTL10Q7L3V2 364 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CACNA2D4Q7Z3S7 1137 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 YAF2Q8IY57 180 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 PRPF31Q8WWY3 499 aaKnown RBP10.28□□□□□ -0.76
SMAD3-215ENST00000560424 SLC5A5Q92911 643 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 TMEM143Q96AN5 459 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 KIF12Q96FN5 646 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CPB2Q96IY4 423 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 LOXL4Q96JB6 756 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CEP170P1Q96L14 293 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CEP89Q96ST8 783 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 LSM14BQ9BX40 385 aaKnown RBP10.28□□□□□ -0.76
SMAD3-215ENST00000560424 ADAM33Q9BZ11 813 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CSRNP2Q9H175 543 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 MINDY3Q9H8M7 445 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 ZNF334Q9HCZ1 680 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-215ENST00000560424 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-215ENST00000560424 MTMR6Q9Y217 621 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 ATP6V1DQ9Y5K8 247 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 GREB1Q4ZG55 1949 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 FASNP49327 2511 aaKnown RBP10.28□□□□□ -0.76
SMAD3-215ENST00000560424 CASTOR2A6NHX0 329 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 ZNF197O14709 1029 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 TM4SF5O14894 197 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 TSPAN1O60635 241 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 ZSCAN22P10073 491 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 CEBPBP17676 345 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 PTMSP20962 102 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 OR1D2P34982 312 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 RFC5P40937 340 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 KPNA1P52294 538 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 CCT2P78371 535 aaKnown RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 AKAP17AQ02040 695 aaKnown RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 RING1Q06587 406 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 PTGDRQ13258 359 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 TUSC3Q13454 348 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 TFDP1Q14186 410 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 NFKBIBQ15653 356 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 DAB2IPQ5VWQ8 1189 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 LARP1BQ659C4 914 aaKnown RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 ANO5Q75V66 913 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 PDZD4Q76G19 769 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 ELMOD1Q8N336 334 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 CCDC148Q8NFR7 591 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 LNX1Q8TBB1 728 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 DEPDC1BQ8WUY9 529 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 ZCCHC14Q8WYQ9 949 aaKnown RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 LENG9Q96B70 501 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 MSANTD3Q96H12 275 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 ZMYND12Q9H0C1 365 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 NXF3Q9H4D5 531 aaKnown RBP10.27□□□□□ -0.77
SMAD3-215ENST00000560424 KLK14Q9P0G3 267 aa10.27□□□□□ -0.77
SMAD3-215ENST00000560424 SRRM3A6NNA2 597 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-215ENST00000560424 PRRG1O14668 218 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 JAK2O60674 1132 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 RPP40O75818 363 aaKnown RBP10.26□□□□□ -0.77
SMAD3-215ENST00000560424 EPN2O95208 641 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 PAPSS2O95340 614 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-215ENST00000560424 NPTXRO95502 500 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 CHRNB1P11230 501 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 FDPSP14324 419 aaKnown RBP10.26□□□□□ -0.77
SMAD3-215ENST00000560424 CDC27P30260 824 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 MCM4P33991 863 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 USP11P51784 963 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 NPEPPSP55786 919 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 RAB33AQ14088 237 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 SLC5A9Q2M3M2 681 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 DGKKQ5KSL6 1271 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 CYP4A22Q5TCH4 519 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-215ENST00000560424 WDR5BQ86VZ2 330 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 FAM177A1Q8N128 213 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-215ENST00000560424 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 FAM184AQ8NB25 1140 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 WASF1Q92558 559 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 GJA10Q969M2 543 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 CORO1BQ9BR76 489 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 EDEM2Q9BV94 578 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 RNF26Q9BY78 433 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-215ENST00000560424 NCOA5Q9HCD5 579 aaKnown RBP10.26□□□□□ -0.77
SMAD3-215ENST00000560424 TRPV5Q9NQA5 729 aa10.26□□□□□ -0.77
SMAD3-215ENST00000560424 VPS45Q9NRW7 570 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms