RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 A0A087WWV3 80 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 TTLL13PA6NNM8 815 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 MAN2B1O00754 1011 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 TBX3O15119 743 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 RECQL4O94761 1208 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 GCFC2P16383 781 aaKnown RBP18.37■□□□□ 0.53
HERC1-207ENST00000560316 FGFR3P22607 806 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 PPP2R5DQ14738 602 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 PRR23CQ6ZRP0 262 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 TCEAL4Q96EI5 215 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 EIF2AK1Q9BQI3 630 aaKnown RBP18.37■□□□□ 0.53
HERC1-207ENST00000560316 LARP6Q9BRS8 491 aaKnown RBP18.37■□□□□ 0.53
HERC1-207ENST00000560316 LMAN1LQ9HAT1 526 aa18.37■□□□□ 0.53
HERC1-207ENST00000560316 LRRIQ4A6NIV6 560 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 CPLX1O14810 134 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 LRP3O75074 770 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 HSPA4P34932 840 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 SATB1Q01826 763 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 DMWDQ09019 674 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 SRSF5Q13243 272 aaKnown RBP18.36■□□□□ 0.53
HERC1-207ENST00000560316 SIM2Q14190 667 aaPredicted RBP18.36■□□□□ 0.53
HERC1-207ENST00000560316 FAM78AQ5JUQ0 283 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 MAMSTRQ6ZN01 415 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 MAEAQ7L5Y9 396 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 FAM3CQ92520 227 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 TRMT61BQ9BVS5 477 aaKnown RBP18.36■□□□□ 0.53
HERC1-207ENST00000560316 PDZD7Q9H5P4 517 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 ZFP14Q9HCL3 533 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 GPRC5CQ9NQ84 441 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 USP20Q9Y2K6 914 aa18.36■□□□□ 0.53
HERC1-207ENST00000560316 HRO43593 1189 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 CDC45O75419 566 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 PTPN2P17706 415 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 TKTP29401 623 aaKnown RBP18.35■□□□□ 0.53
HERC1-207ENST00000560316 CCR3P51677 355 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 TOB2Q14106 344 aaPredicted RBP18.35■□□□□ 0.53
HERC1-207ENST00000560316 CSRP2Q16527 193 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 PRSS36Q5K4E3 855 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 PIK3AP1Q6ZUJ8 805 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 RTL10Q7L3V2 364 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 NOSTRINQ8IVI9 506 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 OXER1Q8TDS5 423 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 CCDC43Q96MW1 224 aaKnown RBP18.35■□□□□ 0.53
HERC1-207ENST00000560316 CORO1BQ9BR76 489 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 AVENQ9NQS1 362 aaPredicted RBP18.35■□□□□ 0.53
HERC1-207ENST00000560316 ANKEF1Q9NU02 776 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 PRMT7Q9NVM4 692 aaPredicted RBP18.35■□□□□ 0.53
HERC1-207ENST00000560316 PIAS3Q9Y6X2 628 aa18.35■□□□□ 0.53
HERC1-207ENST00000560316 CHURC1-FNTBB4DL54 471 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 I3L4J1 428 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 USO1O60763 962 aaKnown RBP18.34■□□□□ 0.53
HERC1-207ENST00000560316 B3GAT3O94766 335 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 LYPLA2O95372 231 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 LRG1P02750 347 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 GDI1P31150 447 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 FNTBP49356 437 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 RARRES1P49788 294 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
HERC1-207ENST00000560316 STK3Q13188 491 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 GAS6Q14393 721 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 TMEM132AQ24JP5 1023 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 GLRA4Q5JXX5 417 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 CD300LGQ6UXG3 332 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 PIGOQ8TEQ8 1089 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 IRF7Q92985 503 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 DDX27Q96GQ7 796 aaKnown RBP18.34■□□□□ 0.53
HERC1-207ENST00000560316 PRIMPOLQ96LW4 560 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 HSD17B14Q9BPX1 270 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 IER2Q9BTL4 223 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 ZNF334Q9HCZ1 680 aaPredicted RBP18.34■□□□□ 0.53
HERC1-207ENST00000560316 GDAQ9Y2T3 454 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 BACE2Q9Y5Z0 518 aa18.34■□□□□ 0.53
HERC1-207ENST00000560316 ARHGEF37A1IGU5 675 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 N4BP3O15049 544 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 BAG4O95429 457 aaKnown RBP18.33■□□□□ 0.52
HERC1-207ENST00000560316 CHRNB1P11230 501 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 CCR2P41597 374 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 BRCC3P46736 316 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 CXCL12P48061 93 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 CLCNKBP51801 687 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 EARS2Q5JPH6 523 aaKnown RBP18.33■□□□□ 0.52
HERC1-207ENST00000560316 VITQ6UXI7 678 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.33■□□□□ 0.52
HERC1-207ENST00000560316 MAP4K3Q8IVH8 894 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 SLFN12Q8IYM2 578 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 FAM177A1Q8N128 213 aaPredicted RBP18.33■□□□□ 0.52
HERC1-207ENST00000560316 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 ASB16Q96NS5 453 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 FZD8Q9H461 694 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 GJB4Q9NTQ9 266 aa18.33■□□□□ 0.52
HERC1-207ENST00000560316 COL4A2P08572 1712 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 WDR27A2RRH5 827 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 FAM205CA6NFA0 338 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 TMEM189-UBE2V1I3L0A0 370 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 PRRG1O14668 218 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 DTNBO60941 627 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 LIG1P18858 919 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 CCNE1P24864 410 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 PSMA5P28066 241 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 ELF1P32519 619 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms