RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 LSM14BQ9BX40 385 aaKnown RBP20.33■□□□□ 0.85
SEMA4B-215ENST00000560089 SLCO1B3Q9NPD5 702 aa20.33■□□□□ 0.85
SEMA4B-215ENST00000560089 NDE1Q9NXR1 346 aa20.33■□□□□ 0.85
SEMA4B-215ENST00000560089 STXBP5LQ9Y2K9 1186 aa20.33■□□□□ 0.85
SEMA4B-215ENST00000560089 FADS3Q9Y5Q0 445 aa20.33■□□□□ 0.85
SEMA4B-215ENST00000560089 POTEFA5A3E0 1075 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 PP2D1A8MPX8 630 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 ZWINTO95229 277 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 POTEIP0CG38 1075 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 ASIC1P78348 528 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 POTEEQ6S8J3 1075 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 C3orf62Q6ZUJ4 267 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 PIK3AP1Q6ZUJ8 805 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 MTDHQ86UE4 582 aaKnown RBP20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 SPOCK2Q92563 424 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 CDK5RAP3Q96JB5 506 aa20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 TUT1Q9H6E5 874 aaKnown RBP20.33■□□□□ 0.84
SEMA4B-215ENST00000560089 A8MXQ7 604 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 AMPD1P23109 780 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 NEK2P51955 445 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 GRM2Q14416 872 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 SLC45A4Q5BKX6 768 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 C10orf76Q5T2E6 689 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 CLNKQ7Z7G1 428 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 DZIP1Q86YF9 867 aaKnown RBP20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 FAF1Q9UNN5 650 aaPredicted RBP20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 SPTLC1O15269 473 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 PRKAB2O43741 272 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 NOL4O94818 638 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 BAG2O95816 211 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 NLRP9Q7RTR0 991 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 FBXO33Q7Z6M2 555 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 NT5DC3Q86UY8 548 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 SRRM1Q8IYB3 904 aaKnown RBP20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 SYCE1Q8N0S2 351 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 FLAD1Q8NFF5 587 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 CASP10Q92851 521 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 TNFRSF25Q93038 417 aa20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 ZMAT2Q96NC0 199 aaKnown RBP20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 KIAA1522Q9P206 1035 aaPredicted RBP20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 SAP30BPQ9UHR5 308 aaKnown RBP20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 TTC7AQ9ULT0 858 aaPredicted RBP20.32■□□□□ 0.84
SEMA4B-215ENST00000560089 E9PBE3 544 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 BAG6P46379 1132 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 RRP1BQ14684 758 aaKnown RBP20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 ADRM1Q16186 407 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 Q6ZNX1 250 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 BBS5Q8N3I7 341 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 HPS3Q969F9 1004 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 CYTH2Q99418 400 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 FGFR1OPO95684 399 aaKnown RBP20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 CHRNA5P30532 468 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 RELAQ04206 551 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 BCL2A1Q16548 175 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 RASSF3Q86WH2 238 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 HES6Q96HZ4 224 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 PRICKLE1Q96MT3 831 aaPredicted RBP20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 BRIP1Q9BX63 1249 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 TRAF3IP3Q9Y228 551 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 FAM32AQ9Y421 112 aaKnown RBP20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 SPO11Q9Y5K1 396 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 C6orf229H3BNL8 230 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 RIMBP2O15034 1052 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 UBA7P41226 1012 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 TBL3Q12788 808 aaKnown RBP20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 TMEM266Q2M3C6 531 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 CTC1Q2NKJ3 1217 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 ARL6IP4Q66PJ3 421 aaKnown RBP20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 SLFN11Q7Z7L1 901 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 ZNF654Q8IZM8 581 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 TTC1Q99614 292 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 EURLQ9NYK6 297 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 TBK1Q9UHD2 729 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 AMFRQ9UKV5 643 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 STX8Q9UNK0 236 aa20.31■□□□□ 0.84
SEMA4B-215ENST00000560089 ABCB11O95342 1321 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 FBP2O00757 339 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 STRNO43815 780 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 STK10O94804 968 aaKnown RBP20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 GAS8O95995 478 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 PRDX5P30044 214 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 CLIP3Q96DZ5 547 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 UBN1Q9NPG3 1134 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 POLLQ9UGP5 575 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 MYPNQ86TC9 1320 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 CBFA2T3O75081 653 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 CYP7A1P22680 504 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 ERFP50548 548 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 HSP90AA5PQ58FG0 334 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 CENPPQ6IPU0 288 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 TRMT10CQ7L0Y3 403 aaKnown RBP20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 LCORLQ8N3X6 602 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 C18orf8Q96DM3 657 aa20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 CDC42EP4Q9H3Q1 356 aaKnown RBP20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 HBS1LQ9Y450 684 aaKnown RBP20.3■□□□□ 0.84
SEMA4B-215ENST00000560089 ANKRD31Q8N7Z5 1873 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 MAGEB2O15479 319 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 PIM1P11309 404 aaPredicted RBP20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 TMED10P49755 219 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms