RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SPRED3Q2MJR0 410 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 SEZ6Q53EL9 994 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 SGO2Q562F6 1265 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 SPDYCQ5MJ68 293 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 TDRD10Q5VZ19 366 aaKnown RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 RDM1Q8NG50 284 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 ASAP3Q8TDY4 903 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 WRNIP1Q96S55 665 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 C1orf112Q9NSG2 853 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 MTRF1LQ9UGC7 380 aaKnown RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 ZNF214Q9UL59 606 aaPredicted RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 UMODL1Q5DID0 1318 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 PASKQ96RG2 1323 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 ZNF541Q9H0D2 1346 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 RIPK2O43353 540 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 VNN1O95497 513 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 ECEL1O95672 775 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 EDN1P05305 212 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 ATP4AP20648 1035 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 GARTP22102 1010 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 DSG3P32926 999 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 KRT17Q04695 432 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 ABHD15Q6UXT9 468 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 C15orf39Q6ZRI6 1047 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 DEFB132Q7Z7B7 95 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 NSUN6Q8TEA1 469 aaKnown RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 IFT74Q96LB3 600 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 VPS33BQ9H267 617 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 TAOK3Q9H2K8 898 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 ADAM7Q9H2U9 754 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 ARHGAP28Q9P2N2 729 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 R3HDM2Q9Y2K5 976 aaKnown RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 NFKBIEO00221 500 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 TP73O15350 636 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 RGS16O15492 202 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 EXTL3O43909 919 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 PAEPP09466 180 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 HARSP12081 509 aaKnown RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 PTPRAP18433 802 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 GJC1P36383 396 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 PIK3CAP42336 1068 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 FNTAP49354 379 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 GCNT1Q02742 428 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 EMC2Q15006 297 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 BRDTQ58F21 947 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 C6orf89Q6UWU4 347 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 MICALCLQ6ZW33 695 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 SCYL3Q8IZE3 742 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 C12orf50Q8NA57 414 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 ZNF280CQ8ND82 737 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 MCPH1Q8NEM0 835 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 SEC16BQ96JE7 1060 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 PWWP2AQ96N64 755 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 XPO6Q96QU8 1125 aaKnown RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 C11orf70Q9BRQ4 267 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 HEMGNQ9BXL5 484 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 APOBEC3GQ9HC16 384 aaKnown RBP10.73□□□□□ -0.69
LRRC28-216ENST00000559819 AAASQ9NRG9 546 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 CYP39A1Q9NYL5 469 aa10.73□□□□□ -0.69
LRRC28-216ENST00000559819 ATXN2Q99700 1313 aaKnown RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 SRRM3A6NNA2 597 aaPredicted RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 FOXO6A8MYZ6 492 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 FSCN2O14926 492 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 C4BPAP04003 597 aaKnown RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 DRD4P21917 467 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 VPS41P49754 854 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 POLGP54098 1239 aaPredicted RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 XRRA1Q6P2D8 792 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 CRELD2Q6UXH1 353 aaPredicted RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 PRUNE1Q86TP1 453 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 SPATS2Q86XZ4 545 aaKnown RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 FNBP1Q96RU3 617 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 CCDC113Q9H0I3 377 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 CDC42EP4Q9H3Q1 356 aaKnown RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 LRRC19Q9H756 370 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 C17orf75Q9HAS0 396 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 PIM2Q9P1W9 311 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 ANKFY1Q9P2R3 1169 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 ASIC3Q9UHC3 531 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 LRRIQ4A6NIV6 560 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 ACSL3O95573 720 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 PSMD6Q15008 389 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 ERMARDQ5T6L9 678 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 ANKS1BQ7Z6G8 1248 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 USP37Q86T82 979 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 BBXQ8WY36 941 aaPredicted RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 FAM129AQ9BZQ8 928 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 MTFR1LQ9H019 292 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 CNOT7Q9UIV1 285 aaKnown RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 AGO2Q9UKV8 859 aaKnown RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 USTQ9Y2C2 406 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 PCDHB4Q9Y5E5 795 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
LRRC28-216ENST00000559819 UTRNP46939 3433 aa10.72□□□□□ -0.69
LRRC28-216ENST00000559819 ATP2C2O75185 946 aa10.71□□□□□ -0.69
LRRC28-216ENST00000559819 SUPT20HL2P0C7V6 817 aa10.71□□□□□ -0.69
LRRC28-216ENST00000559819 RARGP13631 454 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms