RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 NR1D1P20393 614 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PDZD4Q76G19 769 aaPredicted RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 SIAH1Q8IUQ4 282 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 TTC39CQ8N584 583 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 SCFD1Q8WVM8 642 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 RSAD2Q8WXG1 361 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PIDD1Q9HB75 910 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 IFT122Q9HBG6 1241 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ABHD10Q9NUJ1 306 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 LIMA1Q9UHB6 759 aaKnown RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PDE4DIPQ5VU43 2346 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 UBE4BO95155 1302 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ZBTB24O43167 697 aaPredicted RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 FTCDO95954 541 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ITGB3BPQ13352 177 aaPredicted RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 MPZL3Q6UWV2 235 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ZNF148Q9UQR1 794 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PLIN4Q96Q06 1357 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 RGS16O15492 202 aaPredicted RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 STAG3L1P0CL83 205 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ALDH3A1P30838 453 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ALDH7A1P49419 539 aaKnown RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ITKQ08881 620 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 DUSP28Q4G0W2 176 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 SGO2Q562F6 1265 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ALS2CLQ60I27 953 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 CCDC63Q8NA47 563 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PPFIBP2Q8ND30 876 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 MGARPQ8TDB4 240 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 CLEC4DQ8WXI8 215 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 TSNARE1Q96NA8 513 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 MAGED2Q9UNF1 606 aaPredicted RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 ABCA3Q99758 1704 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 TYW5A2RUC4 315 aaKnown RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 ATP2A2P16615 1042 aaKnown RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 SH3D19Q5HYK7 790 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 COG1Q8WTW3 980 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 FUT8Q9BYC5 575 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 DPH5Q9H2P9 285 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 HDAC6Q9UBN7 1215 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 ZNF112Q9UJU3 913 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 NUP188Q5SRE5 1749 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 PRPSAP2O60256 369 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 MOCS3O95396 460 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 HMGCRP04035 888 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 ITGB3P05106 788 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 SNRPFP62306 86 aaKnown RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 NOP14P78316 857 aaKnown RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 AP1ARQ63HQ0 302 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 CASC4Q6P4E1 433 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 ELOA2Q8IYF1 753 aaPredicted RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 HPDLQ96IR7 371 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 SEPT10Q9P0V9 454 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 XIRP1Q702N8 1843 aaKnown RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 A0A1W2PQC6 194 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 LRRD1A4D1F6 860 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 H7C0C1 242 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 FTLP02792 175 aaPredicted RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 SKIP12755 728 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 ATP5OP48047 213 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 DCAF4L1Q3SXM0 396 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 TMEM119Q4V9L6 283 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 FBXW10Q5XX13 1052 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 DENND2CQ68D51 928 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 HIBCHQ6NVY1 386 aaPredicted RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 RBM43Q6ZSC3 357 aaKnown RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 TAOK1Q7L7X3 1001 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 ETNPPLQ8TBG4 499 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 RIN2Q8WYP3 895 aaPredicted RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 MRRFQ96E11 262 aaKnown RBP11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 TMEM169Q96HH4 297 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 MAML3Q96JK9 1138 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 TMEM8AQ9HCN3 771 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 APEX2Q9UBZ4 518 aa11.33□□□□□ -0.6
CARMIL3-202ENST00000559694 SYNGAP1Q96PV0 1343 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 NUP98P52948 1817 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 C2CD2LO14523 706 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 RPLP2P05387 115 aaKnown RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 UCHL3P15374 230 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 SCP2P22307 547 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 GBP1P32455 592 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 ARL4AP40617 200 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 MXRA7P84157 204 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 PRKCZQ05513 592 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 GFPT1Q06210 699 aaPredicted RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 EMBQ6PCB8 327 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 LRRN4CLQ8ND94 238 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 TXNRD2Q9NNW7 524 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 OLFML3Q9NRN5 406 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 ANAPC7Q9UJX3 599 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 UBQLN1Q9UMX0 589 aaKnown RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 CCDC160A6NGH7 325 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 CABYRO75952 493 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms