RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ANHXE9PGG2 379 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 H3BQV1 296 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 SLC16A4O15374 487 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 XYLBO75191 536 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 PROZP22891 400 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 IGFBP6P24592 240 aaPredicted RBP16.37■□□□□ 0.21
LRRC28-213ENST00000559399 TKTP29401 623 aaKnown RBP16.37■□□□□ 0.21
LRRC28-213ENST00000559399 OR1D2P34982 312 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 STRN3Q13033 797 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 HTR4Q13639 388 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 MPZL3Q6UWV2 235 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 ANKS3Q6ZW76 656 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 KCTD17Q8N5Z5 321 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 C3orf58Q8NDZ4 430 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 DDX27Q96GQ7 796 aaKnown RBP16.37■□□□□ 0.21
LRRC28-213ENST00000559399 RTP3Q9BQQ7 232 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 UPF2Q9HAU5 1272 aaKnown RBP16.37■□□□□ 0.21
LRRC28-213ENST00000559399 POLIQ9UNA4 740 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 BACE2Q9Y5Z0 518 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 CDY1Q9Y6F8 540 aa16.37■□□□□ 0.21
LRRC28-213ENST00000559399 VWA3AA6NCI4 1184 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 SFI1A8K8P3 1242 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 I3L4J1 428 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 CCL16O15467 120 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 PI15O43692 258 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 POU2F2P09086 479 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 HARSP12081 509 aaKnown RBP16.36■□□□□ 0.21
LRRC28-213ENST00000559399 PLS3P13797 630 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 KCNE1P15382 129 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 RFX1P22670 979 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 GJB2P29033 226 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 NTHL1P78549 312 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 SOX4Q06945 474 aaPredicted RBP16.36■□□□□ 0.21
LRRC28-213ENST00000559399 HYIQ5T013 277 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 AXDND1Q5T1B0 1012 aaPredicted RBP16.36■□□□□ 0.21
LRRC28-213ENST00000559399 CD300LGQ6UXG3 332 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 ALKAL1Q6UXT8 129 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 CCDC105Q8IYK2 499 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 SYT2Q8N9I0 419 aaPredicted RBP16.36■□□□□ 0.21
LRRC28-213ENST00000559399 SPIRE2Q8WWL2 714 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 CDK5RAP3Q96JB5 506 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 ACAP3Q96P50 834 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 PNMA5Q96PV4 448 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 NTPCRQ9BSD7 190 aaKnown RBP16.36■□□□□ 0.21
LRRC28-213ENST00000559399 CNTN3Q9P232 1028 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 KCNG1Q9UIX4 513 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 CDH7Q9ULB5 785 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 NUMBLQ9Y6R0 609 aa16.36■□□□□ 0.21
LRRC28-213ENST00000559399 KRBA1A5PL33 1030 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 PROB1E7EW31 1015 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 STK25O00506 426 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 PODXLO00592 558 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 ABLIM1O14639 778 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 TOM1L1O75674 476 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 BRCC3P46736 316 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 SMTNP53814 917 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 RAD51AP2Q09MP3 1159 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 ARL6IP4Q66PJ3 421 aaKnown RBP16.35■□□□□ 0.21
LRRC28-213ENST00000559399 RSPO2Q6UXX9 243 aaPredicted RBP16.35■□□□□ 0.21
LRRC28-213ENST00000559399 RTL10Q7L3V2 364 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 TMEM161BQ8NDZ6 487 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 GPR152Q8TDT2 470 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 ZMAT2Q96NC0 199 aaKnown RBP16.35■□□□□ 0.21
LRRC28-213ENST00000559399 KCND2Q9NZV8 630 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 ANKFY1Q9P2R3 1169 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 CA14Q9ULX7 337 aa16.35■□□□□ 0.21
LRRC28-213ENST00000559399 CD2BP2O95400 341 aaKnown RBP16.34■□□□□ 0.21
LRRC28-213ENST00000559399 PLA2G4BP0C869 781 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 MAPTP10636 758 aaKnown RBP16.34■□□□□ 0.21
LRRC28-213ENST00000559399 NBL1P41271 181 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 MCM2P49736 904 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 SLC12A3P55017 1021 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 NOLC1Q14978 699 aaKnown RBP eCLIP16.34■□□□□ 0.21
LRRC28-213ENST00000559399 TMEM119Q4V9L6 283 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 ZPBP2Q6X784 338 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 ST13P5Q8NFI4 369 aaPredicted RBP16.34■□□□□ 0.21
LRRC28-213ENST00000559399 FGF13Q92913 245 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 PLIN2Q99541 437 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 ARHGEF3Q9NR81 526 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 SLC2A4RGQ9NR83 387 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 NUB1Q9Y5A7 615 aa16.34■□□□□ 0.21
LRRC28-213ENST00000559399 SYN3O14994 580 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 RPL9P32969 192 aaKnown RBP16.33■□□□□ 0.2
LRRC28-213ENST00000559399 PABPC1LQ4VXU2 614 aaKnown RBP16.33■□□□□ 0.2
LRRC28-213ENST00000559399 VARS2Q5ST30 1063 aaKnown RBP16.33■□□□□ 0.2
LRRC28-213ENST00000559399 SLC8B1Q6J4K2 584 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 MTSS1LQ765P7 747 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 DTWD2Q8NBA8 298 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 FGF14Q92915 247 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 C18orf25Q96B23 403 aaPredicted RBP16.33■□□□□ 0.2
LRRC28-213ENST00000559399 ZBTB45Q96K62 511 aaPredicted RBP16.33■□□□□ 0.2
LRRC28-213ENST00000559399 AK8Q96MA6 479 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 TBC1D17Q9HA65 648 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 KCNH3Q9ULD8 1083 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 SMC3Q9UQE7 1217 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 PLXNA3P51805 1871 aa16.33■□□□□ 0.2
LRRC28-213ENST00000559399 H0YCG3 227 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 CLDN3O15551 220 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 MEFVO15553 781 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms